RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 H3BRB1 525 aa23.29■■□□□ 1.32
TRIM13-203ENST00000378183 DDX39AO00148 427 aaKnown RBP23.29■■□□□ 1.32
TRIM13-203ENST00000378183 TLR3O15455 904 aaKnown RBP23.29■■□□□ 1.32
TRIM13-203ENST00000378183 MAGEA10P43363 369 aaPredicted RBP23.29■■□□□ 1.32
TRIM13-203ENST00000378183 ACTR2P61160 394 aa23.29■■□□□ 1.32
TRIM13-203ENST00000378183 LETM2Q2VYF4 491 aa23.29■■□□□ 1.32
TRIM13-203ENST00000378183 NEK8Q86SG6 692 aa23.29■■□□□ 1.32
TRIM13-203ENST00000378183 PCYT2Q99447 389 aa23.29■■□□□ 1.32
TRIM13-203ENST00000378183 GDF15Q99988 308 aa23.29■■□□□ 1.32
TRIM13-203ENST00000378183 PRO3102Q9H379 93 aa23.29■■□□□ 1.32
TRIM13-203ENST00000378183 TUT1Q9H6E5 874 aaKnown RBP23.29■■□□□ 1.32
TRIM13-203ENST00000378183 HDAC6Q9UBN7 1215 aa23.29■■□□□ 1.32
TRIM13-203ENST00000378183 PRKAG2Q9UGJ0 569 aa23.29■■□□□ 1.32
TRIM13-203ENST00000378183 MDM2Q00987 491 aaPredicted RBP23.28■■□□□ 1.32
TRIM13-203ENST00000378183 CUL4AQ13619 759 aa23.28■■□□□ 1.32
TRIM13-203ENST00000378183 HIC1Q14526 733 aa23.28■■□□□ 1.32
TRIM13-203ENST00000378183 GDF6Q6KF10 455 aaPredicted RBP23.28■■□□□ 1.32
TRIM13-203ENST00000378183 GJA10Q969M2 543 aa23.28■■□□□ 1.32
TRIM13-203ENST00000378183 CTAGE1Q96RT6 745 aa23.28■■□□□ 1.32
TRIM13-203ENST00000378183 SLC37A4O43826 429 aa23.27■■□□□ 1.32
TRIM13-203ENST00000378183 LGR5O75473 907 aa23.27■■□□□ 1.32
TRIM13-203ENST00000378183 ATG7O95352 703 aa23.27■■□□□ 1.32
TRIM13-203ENST00000378183 CHRDL2Q6WN34 429 aa23.27■■□□□ 1.32
TRIM13-203ENST00000378183 C7orf31Q8N865 590 aa23.27■■□□□ 1.32
TRIM13-203ENST00000378183 SLC5A5Q92911 643 aa23.27■■□□□ 1.32
TRIM13-203ENST00000378183 BADQ92934 168 aa23.27■■□□□ 1.32
TRIM13-203ENST00000378183 TBC1D22BQ9NU19 505 aa23.27■■□□□ 1.32
TRIM13-203ENST00000378183 GTF2IRD1Q9UHL9 959 aa23.27■■□□□ 1.32
TRIM13-203ENST00000378183 GJB2P29033 226 aa23.26■■□□□ 1.31
TRIM13-203ENST00000378183 PPP4R3AQ6IN85 833 aa23.26■■□□□ 1.31
TRIM13-203ENST00000378183 ETNPPLQ8TBG4 499 aa23.26■■□□□ 1.31
TRIM13-203ENST00000378183 RNPEPQ9H4A4 650 aa23.26■■□□□ 1.31
TRIM13-203ENST00000378183 DDX25Q9UHL0 483 aaKnown RBP23.26■■□□□ 1.31
TRIM13-203ENST00000378183 COLQQ9Y215 455 aaPredicted RBP23.26■■□□□ 1.31
TRIM13-203ENST00000378183 KAT6AQ92794 2004 aa23.25■■□□□ 1.31
TRIM13-203ENST00000378183 IGKV6D-21A0A0A0MT36 114 aa23.25■■□□□ 1.31
TRIM13-203ENST00000378183 WNT7AO00755 349 aa23.25■■□□□ 1.31
TRIM13-203ENST00000378183 TIMP1P01033 207 aa23.25■■□□□ 1.31
TRIM13-203ENST00000378183 CYP2C9P11712 490 aa23.25■■□□□ 1.31
TRIM13-203ENST00000378183 RAG1P15918 1043 aa23.25■■□□□ 1.31
TRIM13-203ENST00000378183 SAFBQ15424 915 aaKnown RBP eCLIP23.25■■□□□ 1.31
TRIM13-203ENST00000378183 ABHD15Q6UXT9 468 aa23.25■■□□□ 1.31
TRIM13-203ENST00000378183 UMODL1Q5DID0 1318 aa23.25■■□□□ 1.31
TRIM13-203ENST00000378183 EMSYQ7Z589 1322 aa23.25■■□□□ 1.31
TRIM13-203ENST00000378183 KIF28PB7ZC32 967 aa23.24■■□□□ 1.31
TRIM13-203ENST00000378183 CCNT1O60563 726 aaKnown RBP23.24■■□□□ 1.31
TRIM13-203ENST00000378183 PSMD10O75832 226 aa23.24■■□□□ 1.31
TRIM13-203ENST00000378183 SUPT20HL2P0C7V6 817 aa23.24■■□□□ 1.31
TRIM13-203ENST00000378183 SMIM10L2AP0DMW4 78 aa23.24■■□□□ 1.31
TRIM13-203ENST00000378183 SMIM10L2BP0DMW5 78 aa23.24■■□□□ 1.31
TRIM13-203ENST00000378183 HOXC8P31273 242 aa23.24■■□□□ 1.31
TRIM13-203ENST00000378183 ZNF200P98182 395 aaPredicted RBP23.24■■□□□ 1.31
TRIM13-203ENST00000378183 PTGISQ16647 500 aa23.24■■□□□ 1.31
TRIM13-203ENST00000378183 RIT2Q99578 217 aa23.24■■□□□ 1.31
TRIM13-203ENST00000378183 NOC4LQ9BVI4 516 aaKnown RBP23.24■■□□□ 1.31
TRIM13-203ENST00000378183 PPP1R12CQ9BZL4 782 aa23.24■■□□□ 1.31
TRIM13-203ENST00000378183 FOXP1Q9H334 677 aaPredicted RBP23.24■■□□□ 1.31
TRIM13-203ENST00000378183 SMARCAD1Q9H4L7 1026 aa23.24■■□□□ 1.31
TRIM13-203ENST00000378183 ZNF215Q9UL58 517 aaPredicted RBP23.24■■□□□ 1.31
TRIM13-203ENST00000378183 MYH9P35579 1960 aaKnown RBP23.23■■□□□ 1.31
TRIM13-203ENST00000378183 GCFC2P16383 781 aaKnown RBP23.23■■□□□ 1.31
TRIM13-203ENST00000378183 BMP8BP34820 402 aa23.23■■□□□ 1.31
TRIM13-203ENST00000378183 ZNF746Q6NUN9 644 aaPredicted RBP23.23■■□□□ 1.31
TRIM13-203ENST00000378183 GLG1Q92896 1179 aa23.23■■□□□ 1.31
TRIM13-203ENST00000378183 LBHD1Q9BQE6 289 aaPredicted RBP23.23■■□□□ 1.31
TRIM13-203ENST00000378183 KCNMB3Q9NPA1 279 aa23.23■■□□□ 1.31
TRIM13-203ENST00000378183 SMC3Q9UQE7 1217 aa23.23■■□□□ 1.31
TRIM13-203ENST00000378183 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.23■■□□□ 1.31
TRIM13-203ENST00000378183 MARK3P27448 753 aa23.22■■□□□ 1.31
TRIM13-203ENST00000378183 CYP2C18P33260 490 aa23.22■■□□□ 1.31
TRIM13-203ENST00000378183 KRT76Q01546 638 aa23.22■■□□□ 1.31
TRIM13-203ENST00000378183 LRCH2Q5VUJ6 765 aa23.22■■□□□ 1.31
TRIM13-203ENST00000378183 B3GNT9Q6UX72 402 aa23.22■■□□□ 1.31
TRIM13-203ENST00000378183 PLPPR4Q7Z2D5 763 aa23.22■■□□□ 1.31
TRIM13-203ENST00000378183 DHX38Q92620 1227 aaKnown RBP23.22■■□□□ 1.31
TRIM13-203ENST00000378183 SNX21Q969T3 373 aa23.22■■□□□ 1.31
TRIM13-203ENST00000378183 NAP1L4Q99733 375 aaKnown RBP23.22■■□□□ 1.31
TRIM13-203ENST00000378183 HIPK3Q9H422 1215 aa23.22■■□□□ 1.31
TRIM13-203ENST00000378183 ERAP1Q9NZ08 941 aa23.22■■□□□ 1.31
TRIM13-203ENST00000378183 RANBP2P49792 3224 aaKnown RBP23.21■■□□□ 1.31
TRIM13-203ENST00000378183 GAS7O60861 476 aa23.21■■□□□ 1.31
TRIM13-203ENST00000378183 STAT5BP51692 787 aa23.21■■□□□ 1.31
TRIM13-203ENST00000378183 MIS18BP1Q6P0N0 1132 aa23.21■■□□□ 1.31
TRIM13-203ENST00000378183 POTEDQ86YR6 584 aa23.21■■□□□ 1.31
TRIM13-203ENST00000378183 CCDC60Q8IWA6 550 aaPredicted RBP23.21■■□□□ 1.31
TRIM13-203ENST00000378183 HAS1Q92839 578 aa23.21■■□□□ 1.31
TRIM13-203ENST00000378183 TEKT3Q9BXF9 490 aa23.21■■□□□ 1.31
TRIM13-203ENST00000378183 UNC45AQ9H3U1 944 aa23.21■■□□□ 1.31
TRIM13-203ENST00000378183 SETD4Q9NVD3 440 aa23.21■■□□□ 1.31
TRIM13-203ENST00000378183 KIF3AQ9Y496 699 aa23.21■■□□□ 1.31
TRIM13-203ENST00000378183 SCN5AQ14524 2016 aa23.2■■□□□ 1.3
TRIM13-203ENST00000378183 C17orf102A2RUQ5 167 aa23.2■■□□□ 1.3
TRIM13-203ENST00000378183 K7ELQ4 463 aaPredicted RBP23.2■■□□□ 1.3
TRIM13-203ENST00000378183 U2AF2P26368 475 aaKnown RBP eCLIP23.2■■□□□ 1.39e-7■■□□□ 13.7
TRIM13-203ENST00000378183 ADAM17P78536 824 aa23.2■■□□□ 1.3
TRIM13-203ENST00000378183 MFSD5Q6N075 450 aa23.2■■□□□ 1.3
TRIM13-203ENST00000378183 SWSAP1Q6NVH7 229 aa23.2■■□□□ 1.3
TRIM13-203ENST00000378183 NOSTRINQ8IVI9 506 aa23.2■■□□□ 1.3
TRIM13-203ENST00000378183 SMAP1Q8IYB5 467 aaPredicted RBP23.2■■□□□ 1.3
TRIM13-203ENST00000378183 AFAP1L1Q8TED9 768 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms