RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 E7EWF7 191 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 KCNQ3O43525 872 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 ATP9AO75110 1047 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 HSPA8P11142 646 aaKnown RBP12.74□□□□□ -0.37
NPHP4-202ENST00000378161 STIP1P31948 543 aaKnown RBP12.74□□□□□ -0.37
NPHP4-202ENST00000378161 SCUBE1Q8IWY4 988 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 AGGF1Q8N302 714 aaeCLIP12.74□□□□□ -0.37
NPHP4-202ENST00000378161 RETREG2Q8NC44 543 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 SPIRE2Q8WWL2 714 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 PPP2R3CQ969Q6 453 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 C19orf44Q9H6X5 657 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
NPHP4-202ENST00000378161 ADAMTS2O95450 1211 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 TUBA4AP68366 448 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 ITIH4Q14624 930 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 DENND2CQ68D51 928 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 ZHX3Q9H4I2 956 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 ARHGEF38Q9NXL2 777 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 TUBGCP4Q9UGJ1 667 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 PCDHA7Q9UN72 937 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 SSX2IPQ9Y2D8 614 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 DNM1LO00429 736 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 TPPPO94811 219 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 RNASE9P60153 205 aaKnown RBP12.73□□□□□ -0.37
NPHP4-202ENST00000378161 AMPD3Q01432 767 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 NECTIN1Q15223 517 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 KCTD21Q4G0X4 260 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 SCYL3Q8IZE3 742 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 RBBP8NLQ8NC74 664 aaPredicted RBP12.73□□□□□ -0.37
NPHP4-202ENST00000378161 TRIM47Q96LD4 638 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 MKNK2Q9HBH9 465 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 PNMA2Q9UL42 364 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 ZBTB21Q9ULJ3 1066 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 MAPK8IP1Q9UQF2 711 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 NDUFB9Q9Y6M9 179 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 USP6P35125 1406 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 RSPH3Q86UC2 560 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 TTLL11Q8NHH1 800 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 ENOX1Q8TC92 643 aaKnown RBP12.73□□□□□ -0.37
NPHP4-202ENST00000378161 CABLES1Q8TDN4 633 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 PIGOQ8TEQ8 1089 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 RSPH1Q8WYR4 309 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 XPO6Q96QU8 1125 aaKnown RBP12.73□□□□□ -0.37
NPHP4-202ENST00000378161 VPS16Q9H269 839 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 SAP30BPQ9UHR5 308 aaKnown RBP12.73□□□□□ -0.37
NPHP4-202ENST00000378161 ZNF652Q9Y2D9 606 aa12.73□□□□□ -0.37
NPHP4-202ENST00000378161 LARGE1O95461 756 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 HOXD12P35452 270 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 PEX5P50542 639 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 ADAM9Q13443 819 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 LACTB2Q53H82 288 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-202ENST00000378161 FAM47EQ6ZV65 393 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 KRT27Q7Z3Y8 459 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 ANKRD42Q8N9B4 389 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 HELBQ8NG08 1087 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-202ENST00000378161 PRCCQ92733 491 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-202ENST00000378161 COPRSQ9NQ92 184 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 MTRF1LQ9UGC7 380 aaKnown RBP12.72□□□□□ -0.37
NPHP4-202ENST00000378161 TCEAL9Q9UHQ7 104 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 GGT7Q9UJ14 662 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 SCAIQ8N9R8 606 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 DPF2Q92785 391 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 CFAP57Q96MR6 1250 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 TSG101Q99816 390 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 SLC4A4Q9Y6R1 1079 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 PRR36Q9H6K5 1346 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 HECW2Q9P2P5 1572 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 RXRAP19793 462 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 CALB2P22676 271 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 PHEXP78562 749 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 LRRC8BQ6P9F7 803 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 XAB2Q9HCS7 855 aaKnown RBP12.72□□□□□ -0.37
NPHP4-202ENST00000378161 CCPG1Q9ULG6 757 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 CBFA2T3O75081 653 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 PYGMP11217 842 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 VDRP11473 427 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 BLVRAP53004 296 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 DQX1Q8TE96 717 aaKnown RBP12.72□□□□□ -0.37
NPHP4-202ENST00000378161 RAPGEF5Q92565 580 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 XAGE2Q96GT9 111 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 HAUS7Q99871 368 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 SLC52A2Q9HAB3 445 aa12.72□□□□□ -0.37
NPHP4-202ENST00000378161 PASKQ96RG2 1323 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 KIAA1210Q9ULL0 1709 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 ANO9A1A5B4 782 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 PSMA7O14818 248 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 HDAC4P56524 1084 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 FYB2Q5VWT5 728 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 PDXDC1Q6P996 788 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 ZNF449Q6P9G9 518 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 STKLD1Q8NE28 680 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 HDAC7Q8WUI4 952 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 PIDD1Q9HB75 910 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 SEC63Q9UGP8 760 aaKnown RBP12.71□□□□□ -0.37
NPHP4-202ENST00000378161 TULP4Q9NRJ4 1543 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 GPAA1O43292 621 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 PNOCQ13519 176 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 SGSM1Q2NKQ1 1148 aa12.71□□□□□ -0.37
NPHP4-202ENST00000378161 KAZNQ674X7 775 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms