RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 SH3GL2Q99962 352 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 SMARCAD1Q9H4L7 1026 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 DBNLQ9UJU6 430 aaKnown RBP11.43□□□□□ -0.58
RTN3-206ENST00000377819 HPCAL4Q9UM19 191 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 MAGED2Q9UNF1 606 aaPredicted RBP11.43□□□□□ -0.58
RTN3-206ENST00000377819 KIDINS220Q9ULH0 1771 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 PLEKHH2Q8IVE3 1493 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 GOLGA8SH3BPF8 625 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 MED7O43513 233 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 DEAF1O75398 565 aaPredicted RBP11.43□□□□□ -0.58
RTN3-206ENST00000377819 KRT37O76014 449 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 FMNL1O95466 1100 aaPredicted RBP11.43□□□□□ -0.58
RTN3-206ENST00000377819 IL2RBP14784 551 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 MYO1EQ12965 1108 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 APPBP2Q92624 585 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 EXOC4Q96A65 974 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 PLEKHA8Q96JA3 519 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 DNAJC17Q9NVM6 304 aaKnown RBP11.43□□□□□ -0.58
RTN3-206ENST00000377819 ADD3Q9UEY8 706 aaKnown RBP11.43□□□□□ -0.58
RTN3-206ENST00000377819 INPP5FQ9Y2H2 1132 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 PPIP5K2O43314 1243 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 PRPSAP2O60256 369 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 COBLO75128 1261 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 SPAG7O75391 227 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 NLRP12P59046 1061 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 MDM2Q00987 491 aaPredicted RBP11.43□□□□□ -0.58
RTN3-206ENST00000377819 FSCBQ5H9T9 825 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 PODNQ7Z5L7 613 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 PARVGQ9HBI0 331 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 DYRK4Q9NR20 520 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 TMEM161AQ9NX61 479 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 WASLO00401 505 aaPredicted RBP11.43□□□□□ -0.58
RTN3-206ENST00000377819 HADHAP40939 763 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 GUCA1AP43080 201 aaPredicted RBP11.43□□□□□ -0.58
RTN3-206ENST00000377819 IFT88Q13099 833 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 KRT72Q14CN4 511 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 ZNF280CQ8ND82 737 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 ATG3Q9NT62 314 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 DAPK1P53355 1430 aa11.43□□□□□ -0.58
RTN3-206ENST00000377819 FOSP01100 380 aaPredicted RBP11.42□□□□□ -0.58
RTN3-206ENST00000377819 ALDH1B1P30837 517 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 MAPK4P31152 587 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 E2F5Q15329 346 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 Q3C1V9 767 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 NAA35Q5VZE5 725 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 COG1Q8WTW3 980 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 PIDD1Q9HB75 910 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 ZNF229Q9UJW7 825 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 PRG3Q9Y2Y8 225 aaPredicted RBP11.42□□□□□ -0.58
RTN3-206ENST00000377819 PZPP20742 1482 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 ARHGAP10A1A4S6 786 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 ARIH2O95376 493 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 CA4P22748 312 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 BAG6P46379 1132 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 DMC1Q14565 340 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 INAQ16352 499 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 BBS9Q3SYG4 887 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 FAM26FQ5R3K3 315 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 ZNF467Q7Z7K2 595 aaPredicted RBP11.42□□□□□ -0.58
RTN3-206ENST00000377819 RPRD1BQ9NQG5 326 aaKnown RBP11.42□□□□□ -0.58
RTN3-206ENST00000377819 PA2G4Q9UQ80 394 aaKnown RBP11.42□□□□□ -0.58
RTN3-206ENST00000377819 ATP10AO60312 1499 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 NBNO60934 754 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 ZBED1O96006 694 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 CCT5P48643 541 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 TFAP4Q01664 338 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 ADAM9Q13443 819 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 EXOC3L4Q17RC7 722 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 DNAJC24Q6P3W2 148 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 LRRC31Q6UY01 552 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 CDR2LQ86X02 465 aaPredicted RBP11.42□□□□□ -0.58
RTN3-206ENST00000377819 CRLF3Q8IUI8 442 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 FOPNLQ96NB1 174 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 UIMC1Q96RL1 719 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 CLCA2Q9UQC9 943 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 FAM32AQ9Y421 112 aaKnown RBP11.42□□□□□ -0.58
RTN3-206ENST00000377819 CHUKO15111 745 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 CTNND1O60716 968 aaKnown RBP11.42□□□□□ -0.58
RTN3-206ENST00000377819 ABCD1P33897 745 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 GUCY2DQ02846 1103 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 SGO2Q562F6 1265 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 OR6B2Q6IFH4 312 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 RINLQ6ZS11 566 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 ACAD11Q709F0 780 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 PLA2G4DQ86XP0 818 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 BBS7Q8IWZ6 715 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 ARMC2Q8NEN0 867 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 ACAP3Q96P50 834 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 CDCA7Q9BWT1 371 aaPredicted RBP11.42□□□□□ -0.58
RTN3-206ENST00000377819 PSTPIP2Q9H939 334 aa11.42□□□□□ -0.58
RTN3-206ENST00000377819 H2AFY2Q9P0M6 372 aaPredicted RBP11.42□□□□□ -0.58
RTN3-206ENST00000377819 IQANK1A0A1B0GTG1 560 aa11.41□□□□□ -0.58
RTN3-206ENST00000377819 C11orf95C9JLR9 678 aaPredicted RBP11.41□□□□□ -0.58
RTN3-206ENST00000377819 POLR2FP61218 127 aaKnown RBP11.41□□□□□ -0.58
RTN3-206ENST00000377819 STAMQ92783 540 aa11.41□□□□□ -0.58
RTN3-206ENST00000377819 EGFL8Q99944 293 aa11.41□□□□□ -0.58
RTN3-206ENST00000377819 DOLKQ9UPQ8 538 aa11.41□□□□□ -0.58
RTN3-206ENST00000377819 BCS1LQ9Y276 419 aa11.41□□□□□ -0.58
RTN3-206ENST00000377819 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms