RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 SEC31AO94979 1220 aaKnown RBP11.75□□□□□ -0.53
HIF3A-205ENST00000377670 MAGEA1P43355 309 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 MTMR3Q13615 1198 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 KRT33BQ14525 404 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 ARHGAP44Q17R89 818 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 HHATQ5VTY9 493 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 STOX1Q6ZVD7 989 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 SRGAP1Q7Z6B7 1085 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 CCDC170Q8IYT3 715 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 VPS52Q8N1B4 723 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 KIF2CQ99661 725 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 SAR1BQ9Y6B6 198 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 POLR1AO95602 1720 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-205ENST00000377670 GOLGA8CPA6NN73 597 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 GOLGA8KD6RF30 607 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 SRGAP2CP0DJJ0 459 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 SLC12A2P55011 1212 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 PSMD6Q15008 389 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 WHAMMP3Q1A5X7 153 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 DPCR1Q3MIW9 517 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 FAM83BQ5T0W9 1011 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 CASC4Q6P4E1 433 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 GBP7Q8N8V2 638 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-205ENST00000377670 TCP11Q8WWU5 503 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 FAM167AQ96KS9 214 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 MXD3Q9BW11 206 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 OR52Z1P0C646 297 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 EPHX2P34913 555 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 RECQLP46063 649 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-205ENST00000377670 PLCB1Q9NQ66 1216 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 C6orf222P0C671 652 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-205ENST00000377670 C11orf57Q6ZUT1 292 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-205ENST00000377670 SDCCAG8Q86SQ7 713 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-205ENST00000377670 PGBD3Q8N328 593 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 ANKRD42Q8N9B4 389 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 CTTNBP2NLQ9P2B4 639 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 PPP2R2CQ9Y2T4 447 aa11.75□□□□□ -0.53
HIF3A-205ENST00000377670 RRP15Q9Y3B9 282 aaKnown RBP11.75□□□□□ -0.53
HIF3A-205ENST00000377670 MAP3K7O43318 606 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 FAM117BQ6P1L5 589 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 ZNF365Q70YC5 407 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 UBL4BQ8N7F7 174 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
HIF3A-205ENST00000377670 NUDT12Q9BQG2 462 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 N4BP1O75113 896 aaKnown RBP11.74□□□□□ -0.53
HIF3A-205ENST00000377670 HEXIM1O94992 359 aaKnown RBP11.74□□□□□ -0.53
HIF3A-205ENST00000377670 UPP2O95045 317 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 ABCD1P33897 745 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 SLC9C1Q4G0N8 1177 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 CCDC127Q96BQ5 260 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 EPSTI1Q96J88 318 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 ASIC3Q9UHC3 531 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 TECPR2O15040 1411 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 HOXA13P31271 388 aaPredicted RBP11.74□□□□□ -0.53
HIF3A-205ENST00000377670 CTNNA1P35221 906 aaKnown RBP11.74□□□□□ -0.53
HIF3A-205ENST00000377670 ITIH3Q06033 890 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 SLC39A14Q15043 492 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 CDC37Q16543 378 aaPredicted RBP11.74□□□□□ -0.53
HIF3A-205ENST00000377670 BARGINQ6ZT62 677 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 PHLDB2Q86SQ0 1253 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 TBCKQ8TEA7 893 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 IQSEC2Q5JU85 1478 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 CD163L1Q9NR16 1453 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 TMEM131LA2VDJ0 1609 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 CASP1P29466 404 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 CDC27P30260 824 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 CCT5P48643 541 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 ARHGAP24Q8N264 748 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 OR6J1Q8NGC5 347 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 FAM149B1Q96BN6 582 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 RNF146Q9NTX7 359 aa11.74□□□□□ -0.53
HIF3A-205ENST00000377670 MEIS1O00470 390 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 HMGCS2P54868 508 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 RESTQ13127 1097 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 NKX1-1Q15270 411 aaPredicted RBP11.73□□□□□ -0.53
HIF3A-205ENST00000377670 DENND2CQ68D51 928 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 NME8Q8N427 588 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 CCDC89Q8N998 374 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 LINC00301Q8NCQ3 95 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 RNF26Q9BY78 433 aaPredicted RBP11.73□□□□□ -0.53
HIF3A-205ENST00000377670 TPX2Q9ULW0 747 aaKnown RBP11.73□□□□□ -0.53
HIF3A-205ENST00000377670 CAMTA2O94983 1202 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 MMP1P03956 469 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 SETSIPP0DME0 302 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 RABL6Q3YEC7 729 aaPredicted RBP11.73□□□□□ -0.53
HIF3A-205ENST00000377670 BSPRYQ5W0U4 402 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 AP1ARQ63HQ0 302 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 TYW1BQ6NUM6 668 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 RNF180Q86T96 592 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 N4BP2L2Q92802 583 aaPredicted RBP11.73□□□□□ -0.53
HIF3A-205ENST00000377670 CDHR2Q9BYE9 1310 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 SYNDIG1Q9H7V2 258 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 GSG1L2A8MUP6 293 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 RPS12P25398 132 aaKnown RBP11.73□□□□□ -0.53
HIF3A-205ENST00000377670 NNMTP40261 264 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 OSTNP61366 133 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 LRRC41Q15345 812 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 SNCBQ16143 134 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 FAM71BQ8TC56 605 aa11.73□□□□□ -0.53
HIF3A-205ENST00000377670 CCDC68Q9H2F9 335 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms