RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 IGSF1Q8N6C5 1336 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 ARHGEF37A1IGU5 675 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 USP17L3A6NCW0 530 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 USP17L4A6NCW7 530 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 KRT10P13645 584 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 CCNE1P24864 410 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 MAP2K2P36507 400 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 FAM182BQ5T319 152 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 USP17L1Q7RTZ2 530 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 A0A087WWV3 80 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 EIF4A3P38919 411 aaKnown RBP20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 ACRBPQ8NEB7 543 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 HEXIM2Q96MH2 286 aaKnown RBP20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 NHEJ1Q9H9Q4 299 aaPredicted RBP20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 MECOMQ03112 1051 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 SCYL3Q8IZE3 742 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 PBKQ96KB5 322 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 SAMSN1Q9NSI8 373 aaKnown RBP20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 LRRD1A4D1F6 860 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 FAM160B2Q86V87 743 aa20.53■□□□□ 0.88
TBC1D4-201ENST00000377625 SRPRBQ9Y5M8 271 aaKnown RBP20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 SEC31AO94979 1220 aaKnown RBP20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 SERPING1P05155 500 aa20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 EFCAB13Q8IY85 973 aa20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 HMGB1P1B2RPK0 211 aaPredicted RBP20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 ERVV-1B6SEH8 477 aa20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 MT-ND3P03897 115 aa20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 HOXA13P31271 388 aaPredicted RBP20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 KPNA2P52292 529 aaKnown RBP20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 SCARA5Q6ZMJ2 495 aa20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 RCOR1Q9UKL0 485 aa20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 PCDHB6Q9Y5E3 794 aa20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 PNMA6FA0A0J9YX94 578 aa20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 DHX9Q08211 1270 aaKnown RBP20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 C10orf76Q5T2E6 689 aa20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 CCHCR1Q8TD31 782 aa20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 FIS1Q9Y3D6 152 aa20.52■□□□□ 0.88
TBC1D4-201ENST00000377625 GNGT2O14610 69 aa20.52■□□□□ 0.87
TBC1D4-201ENST00000377625 SRGAP2CP0DJJ0 459 aa20.52■□□□□ 0.87
TBC1D4-201ENST00000377625 HSPA6P17066 643 aa20.52■□□□□ 0.87
TBC1D4-201ENST00000377625 EIF2AK2P19525 551 aaKnown RBP20.52■□□□□ 0.87
TBC1D4-201ENST00000377625 ANXA13P27216 316 aa20.52■□□□□ 0.87
TBC1D4-201ENST00000377625 ZBED6P86452 979 aa20.52■□□□□ 0.87
TBC1D4-201ENST00000377625 RPF1Q9H9Y2 349 aaKnown RBP20.52■□□□□ 0.87
TBC1D4-201ENST00000377625 PRKAG2Q9UGJ0 569 aa20.52■□□□□ 0.87
TBC1D4-201ENST00000377625 SURF1Q15526 300 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 SPDYE1Q8NFV5 336 aaPredicted RBP20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 EPS15L1Q9UBC2 864 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 SOWAHDA6NJG2 315 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 MX2P20592 715 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 CTTNQ14247 550 aaKnown RBP20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 ARMCX2Q7L311 632 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 PPWD1Q96BP3 646 aaKnown RBP20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 IFT88Q13099 833 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 TRIP13Q15645 432 aaPredicted RBP20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 SNCBQ16143 134 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 ENOX1Q8TC92 643 aaKnown RBP20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 RNF139Q8WU17 664 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 PCGF5Q86SE9 256 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 NUDCD1Q96RS6 583 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 UBN2Q6ZU65 1347 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 CDK8P49336 464 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 PAGE5Q96GU1 130 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 RNF14Q9UBS8 474 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 PPP1R9AQ9ULJ8 1098 aa20.51■□□□□ 0.87
TBC1D4-201ENST00000377625 NVLO15381 856 aaKnown RBP20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 PPFIA2O75334 1257 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 IREB2P48200 963 aaKnown RBP20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 MSTO1Q9BUK6 570 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 SPTLC3Q9NUV7 552 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 ZFYVE16Q7Z3T8 1539 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 GOLGA8IPA6NC78 632 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 GOLGA8JA6NMD2 632 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 TBK1Q9UHD2 729 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 PTPN12Q05209 780 aaKnown RBP20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 SPOPLQ6IQ16 392 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 INPP1P49441 399 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 PIH1D3Q9NQM4 214 aaKnown RBP20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 PCDHA13Q9Y5I0 950 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 PHLPP2Q6ZVD8 1323 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 ATXN8OSP0DMR3 200 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 MARK3P27448 753 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 SLCO1A2P46721 670 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 EPHB1P54762 984 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 PHEXP78562 749 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 MKRN3Q13064 507 aaKnown RBP20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 ALCAMQ13740 583 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 GAS2L3Q86XJ1 694 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 CFAP36Q96G28 342 aa20.5■□□□□ 0.87
TBC1D4-201ENST00000377625 TOM1L1O75674 476 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 SNAP25P60880 206 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 GRAPQ13588 217 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 GRAPLQ8TC17 118 aaPredicted RBP20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 ANKRD20A4Q4UJ75 823 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 ANKRD20A8PQ5CZ79 823 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 ANKRD20A2Q5SQ80 823 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 ANKRD20A1Q5TYW2 823 aa20.49■□□□□ 0.87
TBC1D4-201ENST00000377625 NLRP4Q96MN2 994 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms