RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ERMNQ8TAM6 284 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 PAGE5Q96GU1 130 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 CDK5RAP3Q96JB5 506 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 MPHOSPH6Q99547 160 aaKnown RBP11.74□□□□□ -0.53
PDPN-203ENST00000376061 MTRQ99707 1265 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 CUEDC2Q9H467 287 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 TBC1D22BQ9NU19 505 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 STK17AQ9UEE5 414 aa11.74□□□□□ -0.53
PDPN-203ENST00000376061 HOOK1Q9UJC3 728 aaKnown RBP11.74□□□□□ -0.53
PDPN-203ENST00000376061 NFASCO94856 1347 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 ASB14A6NK59 587 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 MAFGO15525 162 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 SPATA31C1P0DKV0 1188 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 RPA1P27694 616 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 TYRO3Q06418 890 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 MORN1Q5T089 497 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 KCNK18Q7Z418 384 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 GAS2L3Q86XJ1 694 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 EIF2AK1Q9BQI3 630 aaKnown RBP11.73□□□□□ -0.53
PDPN-203ENST00000376061 MAGEF1Q9HAY2 307 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 BLOC1S4Q9NUP1 217 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 KIAA1468Q9P260 1216 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 STK24Q9Y6E0 443 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 CASP8AP2Q9UKL3 1982 aa11.73□□□□□ -0.53
PDPN-203ENST00000376061 CCNE2O96020 404 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 CCDC192P0DO97 292 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 AFMP43652 599 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 VEGFBP49765 207 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 HTRA3P83110 453 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 KRT76Q01546 638 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 CYP4A11Q02928 519 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 GSE1Q14687 1217 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 EPHA7Q15375 998 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 SEPT14Q6ZU15 432 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 CATSPER3Q86XQ3 398 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 FBXO16Q8IX29 292 aaPredicted RBP11.72□□□□□ -0.53
PDPN-203ENST00000376061 NEK9Q8TD19 979 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 RAD54LQ92698 747 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 STAMQ92783 540 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 CCDC34Q96HJ3 373 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 MAML3Q96JK9 1138 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 POLR3CQ9BUI4 534 aaPredicted RBP11.72□□□□□ -0.53
PDPN-203ENST00000376061 NT5C3AQ9H0P0 336 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 TSPY26PQ9H489 355 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 KBTBD4Q9NVX7 518 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 TUBE1Q9UJT0 475 aa11.72□□□□□ -0.53
PDPN-203ENST00000376061 DIS3Q9Y2L1 958 aaKnown RBP11.72□□□□□ -0.53
PDPN-203ENST00000376061 MYH9P35579 1960 aaKnown RBP11.72□□□□□ -0.53
PDPN-203ENST00000376061 WDR64B1ANS9 1081 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 GTPBP6O43824 516 aaPredicted RBP11.71□□□□□ -0.53
PDPN-203ENST00000376061 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
PDPN-203ENST00000376061 UBA1P22314 1058 aaKnown RBP11.71□□□□□ -0.53
PDPN-203ENST00000376061 CTGFP29279 349 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 CASP1P29466 404 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 SP2Q02086 613 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 DPYDQ12882 1025 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 MAP2K5Q13163 448 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 STX1AQ16623 288 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 ZNF746Q6NUN9 644 aaPredicted RBP11.71□□□□□ -0.53
PDPN-203ENST00000376061 SASS6Q6UVJ0 657 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 MAMDC4Q6UXC1 1216 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 EEPD1Q7L9B9 569 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 MIER3Q7Z3K6 550 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 DPP9Q86TI2 863 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 NPLOC4Q8TAT6 608 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 SPATA20Q8TB22 786 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 LARP4BQ92615 738 aaKnown RBP11.71□□□□□ -0.53
PDPN-203ENST00000376061 USP6NLQ92738 828 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 DYDC2Q96IM9 177 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 HSD17B14Q9BPX1 270 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 BCAS3Q9H6U6 928 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 JPH1Q9HDC5 661 aaPredicted RBP11.71□□□□□ -0.53
PDPN-203ENST00000376061 TUFT1Q9NNX1 390 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 RGL1Q9NZL6 768 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 TCEAL9Q9UHQ7 104 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 KIAA1024Q9UPX6 916 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 PCDHA5Q9Y5H7 936 aa11.71□□□□□ -0.53
PDPN-203ENST00000376061 A0A087WWV3 80 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 FSD2A1L4K1 749 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 BIN1O00499 593 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 TNPO2O14787 897 aaKnown RBP11.7□□□□□ -0.54
PDPN-203ENST00000376061 ARIH2O95376 493 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 HOXC6P09630 235 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 SFNP31947 248 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 MAP2K2P36507 400 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 JAK3P52333 1124 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 CUL4BQ13620 913 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 CTTNQ14247 550 aaKnown RBP11.7□□□□□ -0.54
PDPN-203ENST00000376061 MCM6Q14566 821 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 NT5DC1Q5TFE4 455 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 RDM1Q8NG50 284 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 SOCS4Q8WXH5 440 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 SMARCE1Q969G3 411 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 SENP7Q9BQF6 1050 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 LXNQ9BS40 222 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 CFHR5Q9BXR6 569 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 KATNBL1Q9H079 304 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 BLZF1Q9H2G9 400 aa11.7□□□□□ -0.54
PDPN-203ENST00000376061 VTA1Q9NP79 307 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms