RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 EPB41L5Q9HCM4 733 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 PPANQ9NQ55 473 aaKnown RBP14.22□□□□□ -0.13
MSH5-204ENST00000375755 FAM198AQ9UFP1 575 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 PAFAH1B1P43034 410 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 BAG6P46379 1132 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 MRPL12P52815 198 aaKnown RBP14.22□□□□□ -0.13
MSH5-204ENST00000375755 DRP2Q13474 957 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 CCDC121Q6ZUS5 278 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 IFT20Q8IY31 132 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 FUKQ8N0W3 1084 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 NUP58Q9BVL2 599 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 OSBPL7Q9BZF2 842 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 SERPINB13Q9UIV8 391 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 SALL4Q9UJQ4 1053 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 COL4A5P29400 1685 aa14.22□□□□□ -0.13
MSH5-204ENST00000375755 SIPA1L1O43166 1804 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 NKRFO15226 690 aaKnown RBP eCLIP14.21□□□□□ -0.13
MSH5-204ENST00000375755 GUCY2DQ02846 1103 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 TTI2Q6NXR4 508 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 HHIPL2Q6UWX4 724 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 CCDC125Q86Z20 511 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 RETREG2Q8NC44 543 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 PIGSQ96S52 555 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 DUSP9Q99956 384 aaKnown RBP14.21□□□□□ -0.13
MSH5-204ENST00000375755 TLR10Q9BXR5 811 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 TDRD3Q9H7E2 651 aaKnown RBP14.21□□□□□ -0.13
MSH5-204ENST00000375755 HAUS2Q9NVX0 235 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 MTMR4Q9NYA4 1195 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 ARHGAP20Q9P2F6 1191 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 TPX2Q9ULW0 747 aaKnown RBP14.21□□□□□ -0.13
MSH5-204ENST00000375755 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.21□□□□□ -0.13
MSH5-204ENST00000375755 PPIP5K2O43314 1243 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 HEXIM1O94992 359 aaKnown RBP14.21□□□□□ -0.13
MSH5-204ENST00000375755 HPDP32754 393 aaPredicted RBP14.21□□□□□ -0.13
MSH5-204ENST00000375755 CDK17Q00537 523 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 STRIP1Q5VSL9 837 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 CNKSR1Q969H4 720 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 GPCPD1Q9NPB8 672 aa14.21□□□□□ -0.13
MSH5-204ENST00000375755 ZNF277Q9NRM2 450 aaPredicted RBP14.21□□□□□ -0.13
MSH5-204ENST00000375755 TMCO5BA8MYB1 307 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 STXBP3O00186 592 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 RAD17O75943 681 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 DPEP1P16444 411 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 KCNA3P22001 575 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 PAK2Q13177 524 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 TRADDQ15628 312 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 TTBK2Q6IQ55 1244 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 BLIDQ8IZY5 108 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 MREGQ8N565 214 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 ANKRD13CQ8N6S4 541 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 ACTR5Q9H9F9 607 aaPredicted RBP14.21□□□□□ -0.14
MSH5-204ENST00000375755 SCAF8Q9UPN6 1271 aaKnown RBP14.21□□□□□ -0.14
MSH5-204ENST00000375755 SUGT1Q9Y2Z0 365 aa14.21□□□□□ -0.14
MSH5-204ENST00000375755 E2F5Q15329 346 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 QPCTQ16769 361 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 GLE1Q53GS7 698 aaKnown RBP14.2□□□□□ -0.14
MSH5-204ENST00000375755 ZNF526Q8TF50 670 aaPredicted RBP14.2□□□□□ -0.14
MSH5-204ENST00000375755 CASKIN2Q8WXE0 1202 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 PRMT6Q96LA8 375 aaPredicted RBP14.2□□□□□ -0.14
MSH5-204ENST00000375755 ZDHHC15Q96MV8 337 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 SCLT1Q96NL6 688 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 ZNF287Q9HBT7 754 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
MSH5-204ENST00000375755 HMGB1P1B2RPK0 211 aaPredicted RBP14.2□□□□□ -0.14
MSH5-204ENST00000375755 RAD21O60216 631 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 EIF4A3P38919 411 aaKnown RBP14.2□□□□□ -0.14
MSH5-204ENST00000375755 KIF11P52732 1056 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 PPP4R3AQ6IN85 833 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 CSGALNACT2Q8N6G5 542 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 SGSM3Q96HU1 749 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 ALS2CR12Q96Q35 445 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 PCDHA6Q9UN73 950 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 PCDHA8Q9Y5H6 950 aa14.2□□□□□ -0.14
MSH5-204ENST00000375755 FRMD3A2A2Y4 597 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 KLRC4O43908 158 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 ZBTB7AO95365 584 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 SLC16A2P36021 539 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 STAT6P42226 847 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 MAATS1Q7Z4T9 603 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 ZSCAN29Q8IWY8 852 aaPredicted RBP14.19□□□□□ -0.14
MSH5-204ENST00000375755 PYM1Q9BRP8 204 aaKnown RBP14.19□□□□□ -0.14
MSH5-204ENST00000375755 PCDHA4Q9UN74 947 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 PLAAQ9Y263 795 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 GOLGA6L7A0A1B0GV03 622 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 SRRM3A6NNA2 597 aaPredicted RBP14.19□□□□□ -0.14
MSH5-204ENST00000375755 M0R2N6 131 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 PSMA7O14818 248 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 OPLAHO14841 1288 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 NEBLO76041 1014 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 JAG1P78504 1218 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 INF2Q27J81 1249 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 ANKRD20A8PQ5CZ79 823 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 MIIPQ5JXC2 388 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 TLDC1Q6P9B6 456 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 KIRREL3Q8IZU9 778 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 COA7Q96BR5 231 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 MYH4Q9Y623 1939 aa14.19□□□□□ -0.14
MSH5-204ENST00000375755 IGKV6D-41A0A0C4DH26 115 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 EPHB6O15197 1021 aa14.18□□□□□ -0.14
MSH5-204ENST00000375755 NAALADL2Q58DX5 795 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms