RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 POLR2MP0CAP2 368 aa18.27■□□□□ 0.51
VARS-215ENST00000375663 FOXP4Q8IVH2 680 aaPredicted RBP18.27■□□□□ 0.51
VARS-215ENST00000375663 RAD54LQ92698 747 aa18.27■□□□□ 0.51
VARS-215ENST00000375663 BHMT2Q9H2M3 363 aa18.27■□□□□ 0.51
VARS-215ENST00000375663 PNMA6FA0A0J9YX94 578 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 FRMD3A2A2Y4 597 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 RASGRF2O14827 1237 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 FAM133BQ5BKY9 247 aaKnown RBP18.26■□□□□ 0.51
VARS-215ENST00000375663 SH2D3CQ8N5H7 860 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 P3H4Q92791 437 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 RAB3IPQ96QF0 476 aaPredicted RBP18.26■□□□□ 0.51
VARS-215ENST00000375663 TROVE2P10155 538 aaKnown RBP eCLIP18.26■□□□□ 0.514e-15■■■■■ 60.1
VARS-215ENST00000375663 DLATP10515 647 aaKnown RBP18.26■□□□□ 0.51
VARS-215ENST00000375663 ERVK-24P63145 666 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 ADCY1Q08828 1119 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 COASYQ13057 564 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 TTLL12Q14166 644 aaPredicted RBP18.26■□□□□ 0.51
VARS-215ENST00000375663 TMEM260Q9NX78 707 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 USP17L5A8MUK1 530 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 MYO1FO00160 1098 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 CHUKO15111 745 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
VARS-215ENST00000375663 DOK7Q18PE1 504 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 ZNF653Q96CK0 615 aa18.26■□□□□ 0.51
VARS-215ENST00000375663 DKC1O60832 514 aaKnown RBP eCLIP18.25■□□□□ 0.511e-11■■■□□ 16.1
VARS-215ENST00000375663 CD19P15391 556 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 GCKP35557 465 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 TRIM68Q6AZZ1 485 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 FAM84BQ96KN1 310 aaPredicted RBP18.25■□□□□ 0.51
VARS-215ENST00000375663 TAF1DQ9H5J8 278 aaPredicted RBP18.25■□□□□ 0.51
VARS-215ENST00000375663 KANSL2Q9H9L4 492 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 E9PMD0 336 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 TRPC3Q13507 836 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 CLEC4GQ6UXB4 293 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 ATP6V1G3Q96LB4 118 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 EDEM3Q9BZQ6 932 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 POLD4Q9HCU8 107 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 SNX24Q9Y343 169 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 ATF7P17544 494 aaPredicted RBP18.25■□□□□ 0.51
VARS-215ENST00000375663 GUCY2CP25092 1073 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 GUCY1A3Q02108 690 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 SNX1Q13596 522 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 FAM102BQ5T8I3 360 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 PDXDC1Q6P996 788 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 ARHGAP24Q8N264 748 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 C1orf112Q9NSG2 853 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 GMNCA6NCL1 334 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 MAGOHP61326 146 aaKnown RBP18.25■□□□□ 0.51
VARS-215ENST00000375663 CCDC89Q8N998 374 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 TEKT3Q9BXF9 490 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 PCDHA6Q9UN73 950 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 PCDHA8Q9Y5H6 950 aa18.25■□□□□ 0.51
VARS-215ENST00000375663 ECEL1O95672 775 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 SGO2Q562F6 1265 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 RSRC2Q7L4I2 434 aaKnown RBP18.24■□□□□ 0.51
VARS-215ENST00000375663 ZNF148Q9UQR1 794 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 ZNF18P17022 549 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 SLMAPQ14BN4 828 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 NTRK3Q16288 839 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 TMC4Q7Z404 712 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 NLRP14Q86W24 1093 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 SPICE1Q8N0Z3 855 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 ITSN1Q15811 1721 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 PREX1Q8TCU6 1659 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 TDP2O95551 362 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 XKR9Q5GH70 373 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 GIMAP8Q8ND71 665 aaPredicted RBP18.24■□□□□ 0.51
VARS-215ENST00000375663 ANO3Q9BYT9 981 aa18.24■□□□□ 0.51
VARS-215ENST00000375663 IRAK1P51617 712 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 UBXN2AP68543 259 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 CEP95Q96GE4 821 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 MS4A14Q96JA4 679 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 ELAC2Q9BQ52 826 aaKnown RBP18.23■□□□□ 0.51
VARS-215ENST00000375663 PARVGQ9HBI0 331 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 UBE2TQ9NPD8 197 aaPredicted RBP18.23■□□□□ 0.51
VARS-215ENST00000375663 SMARCAL1Q9NZC9 954 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 MRPL11Q9Y3B7 192 aaKnown RBP18.23■□□□□ 0.51
VARS-215ENST00000375663 VIRMAQ69YN4 1812 aaKnown RBP18.23■□□□□ 0.51
VARS-215ENST00000375663 GRID2IPA4D2P6 1211 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 H3BQF6 201 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 PPP1R37O75864 691 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 PPP1R21Q6ZMI0 780 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 BRINP3Q76B58 766 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 FBXL16Q8N461 479 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 PCIF1Q9H4Z3 704 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 SALL1Q9NSC2 1324 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 SFI1A8K8P3 1242 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 POC1B-GALNT4F8VUJ3 575 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 IL9RQ01113 521 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 CYP4F22Q6NT55 531 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 BBOF1Q8ND07 529 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 GPR101Q96P66 508 aaPredicted RBP18.23■□□□□ 0.51
VARS-215ENST00000375663 TMEM131LA2VDJ0 1609 aa18.23■□□□□ 0.51
VARS-215ENST00000375663 EIF3HO15372 352 aaKnown RBP eCLIP18.22■□□□□ 0.51
VARS-215ENST00000375663 NSFP46459 744 aaKnown RBP18.22■□□□□ 0.51
VARS-215ENST00000375663 CFAP157Q5JU67 520 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 VTI1AQ96AJ9 217 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 NT5C1BQ96P26 610 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 PSMD1Q99460 953 aa18.22■□□□□ 0.51
VARS-215ENST00000375663 VCXQ9H320 206 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms