RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 NMT2O60551 498 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 TMOD1P28289 359 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 MCF2L2Q86YR7 1114 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 TC2NQ8N9U0 490 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 SPATA4Q8NEY3 305 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 GABPB2Q8TAK5 448 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-203ENST00000375274 TRIM11Q96F44 468 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 DCP1AQ9NPI6 582 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-203ENST00000375274 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-203ENST00000375274 CDHR2Q9BYE9 1310 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 PNMA6FA0A0J9YX94 578 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 P4HA1P13674 534 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 FDPSP14324 419 aaKnown RBP12.5□□□□□ -0.41
PTCH1-203ENST00000375274 TRIM28Q13263 835 aaKnown RBP12.5□□□□□ -0.41
PTCH1-203ENST00000375274 AFAP1L2Q8N4X5 818 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 ADD3Q9UEY8 706 aaKnown RBP12.5□□□□□ -0.41
PTCH1-203ENST00000375274 BCAP29Q9UHQ4 241 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 CROCC2H7BZ55 1655 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 LRRIQ4A6NIV6 560 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 CHUKO15111 745 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 INHBAP08476 426 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 FXR1P51114 621 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTCH1-203ENST00000375274 YWHAGP61981 247 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTCH1-203ENST00000375274 ADCY2Q08462 1091 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 NUGGCQ68CJ6 796 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 RHOT2Q8IXI1 618 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 ACCSQ96QU6 501 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 TRIM6Q9C030 488 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-203ENST00000375274 TMEM206Q9H813 350 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 CCPG1Q9ULG6 757 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 CAPN11Q9UMQ6 739 aa12.5□□□□□ -0.41
PTCH1-203ENST00000375274 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 IRX4P78413 519 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 KRT81Q14533 505 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 TBC1D10BQ4KMP7 808 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-203ENST00000375274 MAP3K21Q5TCX8 1036 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
PTCH1-203ENST00000375274 GUF1Q8N442 669 aaKnown RBP12.49□□□□□ -0.41
PTCH1-203ENST00000375274 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 NUF2Q9BZD4 464 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 SNX24Q9Y343 169 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 LRRD1A4D1F6 860 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 SEMA3FQ13275 785 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 RASGRP2Q7LDG7 609 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 MXD3Q9BW11 206 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 ANO3Q9BYT9 981 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 LIMA1Q9UHB6 759 aaKnown RBP12.49□□□□□ -0.41
PTCH1-203ENST00000375274 GJA3Q9Y6H8 435 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 NCK2O43639 380 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 CTDNEP1O95476 244 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 TMEM191BP0C7N4 346 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 KCNH2Q12809 1159 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 HAUS1Q96CS2 278 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 ELAC2Q9BQ52 826 aaKnown RBP12.49□□□□□ -0.41
PTCH1-203ENST00000375274 TARSL2A2RTX5 802 aaKnown RBP12.49□□□□□ -0.41
PTCH1-203ENST00000375274 BMP3P12645 472 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 RNASELQ05823 741 aaKnown RBP12.49□□□□□ -0.41
PTCH1-203ENST00000375274 NR1I3Q14994 352 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 TMED2Q15363 201 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 USP49Q70CQ1 688 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 TBC1D1Q86TI0 1168 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-203ENST00000375274 ZBTB8OSQ8IWT0 167 aa12.49□□□□□ -0.41
PTCH1-203ENST00000375274 CPDO75976 1380 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 TCP10L2B9ZVM9 353 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 SGK1O00141 431 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 PODXLO00592 558 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 RASIP1Q5U651 963 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 RAD9BQ6WBX8 426 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 IGDCC4Q8TDY8 1250 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 CCT6BQ92526 530 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 E9PCH4 1651 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 CASQ2O14958 399 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-203ENST00000375274 SART1O43290 800 aaKnown RBP12.48□□□□□ -0.41
PTCH1-203ENST00000375274 ACSL3O95573 720 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 MMEP08473 750 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 PIK3CAP42336 1068 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 SEPT6Q14141 434 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 KCNB1Q14721 858 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 TTBK2Q6IQ55 1244 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 RPAINQ86UA6 219 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 SLC17A8Q8NDX2 589 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 DDX47Q9H0S4 455 aaKnown RBP12.48□□□□□ -0.41
PTCH1-203ENST00000375274 PCDHB4Q9Y5E5 795 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 ARHGEF40Q8TER5 1519 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.48□□□□□ -0.41
PTCH1-203ENST00000375274 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-203ENST00000375274 ANKFY1Q9P2R3 1169 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 TTLL3Q9Y4R7 772 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 MAD1L1Q9Y6D9 718 aa12.48□□□□□ -0.41
PTCH1-203ENST00000375274 EXOC1LA0A1B0GW35 172 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 GIPC1O14908 333 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 CRCPO75575 148 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 BBOX1O75936 387 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 TNNC2P02585 160 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 PDE6BP35913 854 aa12.47□□□□□ -0.41
PTCH1-203ENST00000375274 POLGP54098 1239 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-203ENST00000375274 TRIP13Q15645 432 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms