RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 R3HCC1Q9Y3T6 440 aaKnown RBP2.76□□□□□ -1.97
CCDC7-204ENST00000375025 LTN1O94822 1766 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 GOLGA6CA6NDK9 693 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 GOLGA6BA6NDN3 693 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 RASGRP1O95267 797 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 GOLGA6DP0CG33 693 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 MED14OSP0DP75 135 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 SRFP11831 508 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 EIF4BP23588 611 aaKnown RBP2.76□□□□□ -1.97
CCDC7-204ENST00000375025 ST13P50502 369 aaKnown RBP2.76□□□□□ -1.97
CCDC7-204ENST00000375025 KIF23Q02241 960 aaPredicted RBP2.76□□□□□ -1.97
CCDC7-204ENST00000375025 TTF1Q15361 905 aaPredicted RBP2.76□□□□□ -1.97
CCDC7-204ENST00000375025 TCEA2Q15560 299 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 HYIQ5T013 277 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 ANKS3Q6ZW76 656 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 MYO1HQ8N1T3 1032 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 ZNF296Q8WUU4 475 aaPredicted RBP2.76□□□□□ -1.97
CCDC7-204ENST00000375025 CHAC2Q8WUX2 184 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 TSR2Q969E8 191 aaKnown RBP2.76□□□□□ -1.97
CCDC7-204ENST00000375025 NEUROD6Q96NK8 337 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 PRAM1Q96QH2 718 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 DUSP23Q9BVJ7 150 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 RETREG1Q9H6L5 497 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 DISC1Q9NRI5 854 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 GOLGA6AQ9NYA3 693 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 GGT7Q9UJ14 662 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 SPG7Q9UQ90 795 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 ANKRD31Q8N7Z5 1873 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 KIF24Q5T7B8 1368 aa2.76□□□□□ -1.97
CCDC7-204ENST00000375025 COL11A2P13942 1736 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 ESYT3A0FGR9 886 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 B8ZZF3 427 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 PRRT4C9JH25 899 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 DHX16O60231 1041 aaKnown RBP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 ZNF862O60290 1169 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 HIP1RO75146 1068 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 TCEA3O75764 348 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 U2AF1L5P0DN76 240 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 SOX5P35711 763 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 HTR3AP46098 478 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 U2AF1Q01081 240 aaKnown RBP eCLIP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 SPRED3Q2MJR0 410 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 TNNI3KQ59H18 835 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 NXNQ6DKJ4 435 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 C22orf34Q6ZV56 151 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 CREBRFQ8IUR6 639 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 LRRC56Q8IYG6 542 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 SPICE1Q8N0Z3 855 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 LINC00116Q8NCU8 138 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 CORO1BQ9BR76 489 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 ZNF408Q9H9D4 720 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 LIN7BQ9HAP6 207 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 LGR6Q9HBX8 967 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 AP4E1Q9UPM8 1137 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 MSRB2Q9Y3D2 182 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 PCDHGB7Q9Y5F8 929 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 USP42Q9H9J4 1324 aaKnown RBP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 RTL1A6NKG5 1358 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 RIC1Q4ADV7 1423 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 MON2Q7Z3U7 1717 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 FAM170AA1A519 330 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 KLRG2A4D1S0 409 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 LRRC10BA6NIK2 292 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 RNASEH2AO75792 299 aaKnown RBP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 HNRNPCP07910 306 aaKnown RBP eCLIP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 CNGA1P29973 690 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 CDKN1CP49918 316 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 ID3Q02535 119 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 DDR1Q08345 913 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 KRT72Q14CN4 511 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 AOC3Q16853 763 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 ANKRD23Q86SG2 305 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 CPXCR1Q8N123 301 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 SHISA4Q96DD7 197 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 ERP27Q96DN0 273 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 TRIM44Q96DX7 344 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 HERPUD2Q9BSE4 406 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 LRFN3Q9BTN0 628 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 AS3MTQ9HBK9 375 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 CD320Q9NPF0 282 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 ADARB2Q9NS39 739 aaKnown RBP2.75□□□□□ -1.97
CCDC7-204ENST00000375025 PRKAG3Q9UGI9 489 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 ACAD8Q9UKU7 415 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 PCOLCE2Q9UKZ9 415 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 SYNPO2Q9UMS6 1093 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 RABGAP1Q9Y3P9 1069 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 DAGLAQ9Y4D2 1042 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 ZNF541Q9H0D2 1346 aa2.75□□□□□ -1.97
CCDC7-204ENST00000375025 IGHA2P01877 340 aa2.74□□□□□ -1.97
CCDC7-204ENST00000375025 IFIT2P09913 472 aaKnown RBP2.74□□□□□ -1.97
CCDC7-204ENST00000375025 PEX19P40855 299 aa2.74□□□□□ -1.97
CCDC7-204ENST00000375025 ARHGEF6Q15052 776 aa2.74□□□□□ -1.97
CCDC7-204ENST00000375025 C8orf34Q49A92 452 aa2.74□□□□□ -1.97
CCDC7-204ENST00000375025 C2orf27AQ580R0 203 aa2.74□□□□□ -1.97
CCDC7-204ENST00000375025 AKNAD1Q5T1N1 836 aa2.74□□□□□ -1.97
CCDC7-204ENST00000375025 MAP1SQ66K74 1059 aaPredicted RBP2.74□□□□□ -1.97
CCDC7-204ENST00000375025 ZSCAN30Q86W11 494 aa2.74□□□□□ -1.97
CCDC7-204ENST00000375025 TCEAL8Q8IYN2 117 aa2.74□□□□□ -1.97
CCDC7-204ENST00000375025 FAM181AQ8N9Y4 354 aa2.74□□□□□ -1.97
CCDC7-204ENST00000375025 PPHLN1Q8NEY8 458 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms