RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 RSPH10BP0C881 870 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 GCFC2P16383 781 aaKnown RBP17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 RNASE9P60153 205 aaKnown RBP17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 ARHGAP4P98171 946 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 ADAM9Q13443 819 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 KLHDC7AQ5VTJ3 777 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 TRIM59Q8IWR1 403 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 CCDC65Q8IXS2 484 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 TBC1D5Q92609 795 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 RPGRIP1Q96KN7 1286 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 ALS2CR12Q96Q35 445 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 NT5C3AQ9H0P0 336 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 FAM198AQ9UFP1 575 aa17.18■□□□□ 0.34
TMEM50A-201ENST00000374358 FAM86B1E9PN63 330 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 TUBBP07437 444 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 FAM86B2P0C5J1 330 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 SLC12A3P55017 1021 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 SPIRE1Q08AE8 756 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 CERKLQ49MI3 558 aaPredicted RBP17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 HYIQ5T013 277 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 SFMBT2Q5VUG0 894 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 SPICE1Q8N0Z3 855 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 LRRC27Q9C0I9 530 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 GOLPH3Q9H4A6 298 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 RBM12Q9NTZ6 932 aaKnown RBP17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 KDM3AQ9Y4C1 1321 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 QSER1Q2KHR3 1735 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 A0A087X0T9 212 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 AGPSO00116 658 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 FAM228BP0C875 321 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 KLRC1P26715 233 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 MSL1Q68DK7 614 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 CEP72Q9P209 647 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 ADAMTS1Q9UHI8 967 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 HYOU1Q9Y4L1 999 aa17.17■□□□□ 0.34
TMEM50A-201ENST00000374358 NRXN2Q9P2S2 1712 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 ZSCAN5CA6NGD5 496 aaPredicted RBP17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 NR2F2P24468 414 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 MAP9Q49MG5 647 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 SLC9C1Q4G0N8 1177 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 CCDC181Q5TID7 509 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 SND1Q7KZF4 910 aaKnown RBP eCLIP17.16■□□□□ 0.341e-7■■■□□ 16.6
TMEM50A-201ENST00000374358 IQCDQ96DY2 449 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 DHX36Q9H2U1 1008 aaKnown RBP17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 LCMT1Q9UIC8 334 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 SCN9AQ15858 1988 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 PALMO75781 387 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 PRPF6O94906 941 aaKnown RBP17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 MYBP10242 640 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 POLD1P28340 1107 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 ICA1Q05084 483 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 KCNA1Q09470 495 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 HHIPL2Q6UWX4 724 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 SFR1Q86XK3 245 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 MSL3Q8N5Y2 521 aaKnown RBP17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 ETNPPLQ8TBG4 499 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 REEP2Q9BRK0 252 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 PSD3Q9NYI0 1048 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 SUGT1Q9Y2Z0 365 aa17.16■□□□□ 0.34
TMEM50A-201ENST00000374358 A0A0U1RQG5 324 aaPredicted RBP17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 ESYT3A0FGR9 886 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 SLC9A1P19634 815 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 HOXD13P35453 343 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 ACTN2P35609 894 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 KCNH2Q12809 1159 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 SKIDA1Q1XH10 827 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 HAUS3Q68CZ6 603 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 LENG9Q96B70 501 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 NOX5Q96PH1 765 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 SPATA31C1P0DKV0 1188 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 EPS15P42566 896 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 AENQ8WTP8 325 aaKnown RBP17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 ZNF622Q969S3 477 aaKnown RBP eCLIP17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 MED4Q9NPJ6 270 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 MYO3BQ8WXR4 1341 aa17.15■□□□□ 0.34
TMEM50A-201ENST00000374358 SSU72P8A0A1W2PR75 194 aa17.14■□□□□ 0.34
TMEM50A-201ENST00000374358 SFI1A8K8P3 1242 aa17.14■□□□□ 0.34
TMEM50A-201ENST00000374358 F5H6K3 240 aa17.14■□□□□ 0.34
TMEM50A-201ENST00000374358 PJA2O43164 708 aa17.14■□□□□ 0.34
TMEM50A-201ENST00000374358 AARSP49588 968 aaKnown RBP eCLIP17.14■□□□□ 0.34
TMEM50A-201ENST00000374358 KLRC3Q07444 240 aa17.14■□□□□ 0.34
TMEM50A-201ENST00000374358 MMGT1Q8N4V1 131 aa17.14■□□□□ 0.34
TMEM50A-201ENST00000374358 ACBD3Q9H3P7 528 aa17.14■□□□□ 0.34
TMEM50A-201ENST00000374358 NDUFB10O96000 172 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 SERPING1P05155 500 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 GIT2Q14161 759 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 DCAF17Q5H9S7 520 aaPredicted RBP17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 CRYGNQ8WXF5 182 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 CEP63Q96MT8 703 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 VIPAS39Q9H9C1 493 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 RGL1Q9NZL6 768 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 COL11A2P13942 1736 aaPredicted RBP17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 OPLAHO14841 1288 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 TCP1P17987 556 aaKnown RBP17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 MCM3P25205 808 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 CASP4P49662 377 aa17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 RRP1BQ14684 758 aaKnown RBP17.14■□□□□ 0.33
TMEM50A-201ENST00000374358 KIAA0753Q2KHM9 967 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms