RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 ZHX3Q9H4I2 956 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 GDF3Q9NR23 364 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 ADAMTS1Q9UHI8 967 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 LY75O60449 1722 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 KIF13BQ9NQT8 1826 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
PTPN20-204ENST00000374346 BTNL10A8MVZ5 291 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 TLR2O60603 784 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 HEXIM1O94992 359 aaKnown RBP12.53□□□□□ -0.4
PTPN20-204ENST00000374346 NR2F2P24468 414 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 KLRC1P26715 233 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 ARID5AQ03989 594 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 KCNH2Q12809 1159 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 CFAP58Q5T655 872 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 MOXD1Q6UVY6 613 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 FAM196AQ6ZSG2 479 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 FRMD5Q7Z6J6 570 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 VPS36Q86VN1 386 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 FAM133AQ8N9E0 248 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 WHAMMQ8TF30 809 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 SCFD1Q8WVM8 642 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 ZFP91Q96JP5 570 aaPredicted RBP12.53□□□□□ -0.4
PTPN20-204ENST00000374346 CCDC17Q96LX7 622 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 KCTD10Q9H3F6 313 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 POLLQ9UGP5 575 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 PCDHA2Q9Y5H9 948 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 USP17L10C9JJH3 530 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 EIF3HO15372 352 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPN20-204ENST00000374346 CALUO43852 315 aaPredicted RBP12.53□□□□□ -0.4
PTPN20-204ENST00000374346 PPP1R11O60927 126 aaPredicted RBP12.53□□□□□ -0.4
PTPN20-204ENST00000374346 CYP11B2P19099 503 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 GUCY2DQ02846 1103 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 AP3B2Q13367 1082 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 SLC51AQ86UW1 340 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 GPIHBP1Q8IV16 184 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 MS4A14Q96JA4 679 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 C8orf37Q96NL8 207 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 COA1Q9GZY4 146 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 EPB41L5Q9HCM4 733 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 SMARCAL1Q9NZC9 954 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 EHD2Q9NZN4 543 aa12.53□□□□□ -0.4
PTPN20-204ENST00000374346 ARMCX3Q9UH62 379 aaPredicted RBP12.53□□□□□ -0.4
PTPN20-204ENST00000374346 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
PTPN20-204ENST00000374346 CYP3A7-CYP3A51PA0A087WV96 503 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 POTEB3A0JP26 581 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 POTECB2RU33 542 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 FTCDO95954 541 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 CYP3A7P24462 503 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 RPL13P26373 211 aaKnown RBP12.52□□□□□ -0.4
PTPN20-204ENST00000374346 ANXA13P27216 316 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 SLC16A2P36021 539 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 GNGT1P63211 74 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 RPS6KA1Q15418 735 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 TTBK2Q6IQ55 1244 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 POTEBQ6S5H4 581 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 ZC3H3Q8IXZ2 948 aaKnown RBP12.52□□□□□ -0.4
PTPN20-204ENST00000374346 BCAS4Q8TDM0 211 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 IFT81Q8WYA0 676 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 KCNMB3Q9NPA1 279 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 PLCB1Q9NQ66 1216 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 HDAC9Q9UKV0 1011 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 DNM3Q9UQ16 869 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 PCDHA1Q9Y5I3 950 aa12.52□□□□□ -0.4
PTPN20-204ENST00000374346 A0A087X0T9 212 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 FLOT1O75955 427 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 SERPINB2P05120 415 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 FAM228BP0C875 321 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
PTPN20-204ENST00000374346 KCTD1Q719H9 257 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 MREGQ8N565 214 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 EIF1ADQ8N9N8 165 aaKnown RBP12.52□□□□□ -0.41
PTPN20-204ENST00000374346 LMBR1Q8WVP7 490 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
PTPN20-204ENST00000374346 PBKQ96KB5 322 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 CRAMP1Q96RY5 1269 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 MXD3Q9BW11 206 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 METTL14Q9HCE5 456 aaKnown RBP12.52□□□□□ -0.41
PTPN20-204ENST00000374346 USP40Q9NVE5 1235 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 NFU1Q9UMS0 254 aa12.52□□□□□ -0.41
PTPN20-204ENST00000374346 TBX3O15119 743 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 AFPP02771 609 aaKnown RBP12.51□□□□□ -0.41
PTPN20-204ENST00000374346 GLI1P08151 1106 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 HOXA10P31260 410 aaPredicted RBP12.51□□□□□ -0.41
PTPN20-204ENST00000374346 DNA2P51530 1060 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 MRPS25P82663 173 aaKnown RBP12.51□□□□□ -0.41
PTPN20-204ENST00000374346 SKOR1P84550 965 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 CDC37Q16543 378 aaPredicted RBP12.51□□□□□ -0.41
PTPN20-204ENST00000374346 KNOP1Q1ED39 458 aaKnown RBP12.51□□□□□ -0.41
PTPN20-204ENST00000374346 CLEC10AQ8IUN9 316 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 GJA10Q969M2 543 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 ZIM3Q96PE6 472 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 KRT12Q99456 494 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 ANO3Q9BYT9 981 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 TRAF3IP3Q9Y228 551 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 GOLGA6L10A6NI86 522 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 F8W031 263 aaPredicted RBP12.51□□□□□ -0.41
PTPN20-204ENST00000374346 SHMT1P34896 483 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 SLC12A3P55017 1021 aa12.51□□□□□ -0.41
PTPN20-204ENST00000374346 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms