RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 MORC4Q8TE76 937 aa10.86□□□□□ -0.67
PTPN20-202ENST00000374339 CCDC47Q96A33 483 aaKnown RBP10.86□□□□□ -0.67
PTPN20-202ENST00000374339 ZFP91Q96JP5 570 aaPredicted RBP10.86□□□□□ -0.67
PTPN20-202ENST00000374339 UIMC1Q96RL1 719 aa10.86□□□□□ -0.67
PTPN20-202ENST00000374339 PLIN2Q99541 437 aa10.86□□□□□ -0.67
PTPN20-202ENST00000374339 SENP7Q9BQF6 1050 aa10.86□□□□□ -0.67
PTPN20-202ENST00000374339 EIF2AK1Q9BQI3 630 aaKnown RBP10.86□□□□□ -0.67
PTPN20-202ENST00000374339 UNC45AQ9H3U1 944 aa10.86□□□□□ -0.67
PTPN20-202ENST00000374339 DIS3Q9Y2L1 958 aaKnown RBP10.86□□□□□ -0.67
PTPN20-202ENST00000374339 PCDHA5Q9Y5H7 936 aa10.86□□□□□ -0.67
PTPN20-202ENST00000374339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.85□□□□□ -0.67
PTPN20-202ENST00000374339 WDR64B1ANS9 1081 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 DHX15O43143 795 aaKnown RBP10.85□□□□□ -0.67
PTPN20-202ENST00000374339 CA12O43570 354 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 CHMP2AO43633 222 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 RGS20O76081 388 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 SARSP49591 514 aaKnown RBP10.85□□□□□ -0.67
PTPN20-202ENST00000374339 NLRP12P59046 1061 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 DPYDQ12882 1025 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 GRM1Q13255 1194 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 ITGB3BPQ13352 177 aaPredicted RBP10.85□□□□□ -0.67
PTPN20-202ENST00000374339 GRB14Q14449 540 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 CYP4F22Q6NT55 531 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 C17orf99Q6UX52 265 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 MIER3Q7Z3K6 550 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 CATSPER3Q86XQ3 398 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 SMAP1Q8IYB5 467 aaPredicted RBP10.85□□□□□ -0.67
PTPN20-202ENST00000374339 GRAMD1CQ8IYS0 662 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 RAD54LQ92698 747 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 MS4A3Q96HJ5 214 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 CAPNS2Q96L46 248 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 PNMA5Q96PV4 448 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 HSD17B14Q9BPX1 270 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 DACH1Q9UI36 760 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 CPA4Q9UI42 421 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 KIAA1024Q9UPX6 916 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 DNM3Q9UQ16 869 aa10.85□□□□□ -0.67
PTPN20-202ENST00000374339 POTEB3A0JP26 581 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 EML1O00423 815 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 FOXN1O15353 648 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 DKC1O60832 514 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTPN20-202ENST00000374339 MED24O75448 989 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 P4HBP07237 508 aaKnown RBP10.84□□□□□ -0.67
PTPN20-202ENST00000374339 SPATA31C1P0DKV0 1188 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 KCNA2P16389 499 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 CRHR2Q13324 411 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 ZNF792Q3KQV3 632 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 ANO6Q4KMQ2 910 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 CNNM4Q6P4Q7 775 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 POTEBQ6S5H4 581 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 DPP9Q86TI2 863 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 MSL3Q8N5Y2 521 aaKnown RBP10.84□□□□□ -0.67
PTPN20-202ENST00000374339 FAM200AQ8TCP9 573 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 ERCC4Q92889 916 aaPredicted RBP10.84□□□□□ -0.67
PTPN20-202ENST00000374339 C7orf25Q9BPX7 421 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 NUDT12Q9BQG2 462 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 R3HDMLQ9H3Y0 253 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 GRPEL1Q9HAV7 217 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 JPH1Q9HDC5 661 aaPredicted RBP10.84□□□□□ -0.67
PTPN20-202ENST00000374339 BMP2KQ9NSY1 1161 aaPredicted RBP10.84□□□□□ -0.67
PTPN20-202ENST00000374339 BLOC1S4Q9NUP1 217 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 PKD2L1Q9P0L9 805 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 SLC9A2Q9UBY0 812 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 SAMM50Q9Y512 469 aa10.84□□□□□ -0.67
PTPN20-202ENST00000374339 POTEFA5A3E0 1075 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 DDX39AO00148 427 aaKnown RBP10.83□□□□□ -0.68
PTPN20-202ENST00000374339 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
PTPN20-202ENST00000374339 BIN1O00499 593 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 ATP9AO75110 1047 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 SLITRK3O94933 977 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 RPN1P04843 607 aaKnown RBP10.83□□□□□ -0.68
PTPN20-202ENST00000374339 ZNF165P49910 485 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 CYP4A11Q02928 519 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 CUL4BQ13620 913 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 MORC3Q14149 939 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 NEDD9Q14511 834 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 MCM6Q14566 821 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 KCNB1Q14721 858 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 CT47A1Q5JQC4 288 aaPredicted RBP10.83□□□□□ -0.68
PTPN20-202ENST00000374339 POTEGQ6S5H5 508 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 MAMDC4Q6UXC1 1216 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 SEPT14Q6ZU15 432 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 TPH2Q8IWU9 490 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 MLKLQ8NB16 471 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 FGD4Q96M96 766 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 NACC1Q96RE7 527 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 MTRQ99707 1265 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 TRIM9Q9C026 710 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 ZSWIM4Q9H7M6 989 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 VTA1Q9NP79 307 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 MAN1B1Q9UKM7 699 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 PCDHA10Q9Y5I2 948 aa10.83□□□□□ -0.68
PTPN20-202ENST00000374339 SYNGAP1Q96PV0 1343 aa10.82□□□□□ -0.68
PTPN20-202ENST00000374339 PVALEFA0A1B0GWK0 134 aa10.82□□□□□ -0.68
PTPN20-202ENST00000374339 COBLO75128 1261 aa10.82□□□□□ -0.68
PTPN20-202ENST00000374339 EYA4O95677 639 aa10.82□□□□□ -0.68
PTPN20-202ENST00000374339 PSAPP07602 524 aa10.82□□□□□ -0.68
PTPN20-202ENST00000374339 PLA2G4BP0C869 781 aa10.82□□□□□ -0.68
PTPN20-202ENST00000374339 QARSP47897 775 aaKnown RBP10.82□□□□□ -0.68
PTPN20-202ENST00000374339 ASIC1P78348 528 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms