RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 NLRP14Q86W24 1093 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 MLXIPQ9HAP2 919 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 HOMER2Q9NSB8 354 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 NFU1Q9UMS0 254 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 PCDHA1Q9Y5I3 950 aa12.29□□□□□ -0.44
RPRD1B-201ENST00000373433 CICQ96RK0 1608 aaPredicted RBP12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 ANO9A1A5B4 782 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 B4DLN1 442 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 MOCS3O95396 460 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 CFBP00751 764 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 RPS12P25398 132 aaKnown RBP12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 RCAN1P53805 252 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 NONOQ15233 471 aaKnown RBP eCLIP12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 ANGEL2Q5VTE6 544 aaKnown RBP12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 CCDC42Q96M95 316 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 SNX12Q9UMY4 172 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 YDJCA8MPS7 323 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 BACH1O14867 736 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 GBP2P32456 591 aaPredicted RBP12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 SMTNP53814 917 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 ZFPM1Q8IX07 1006 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 ANKRD13CQ8N6S4 541 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 MYCBPAPQ8TBZ2 947 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 COA7Q96BR5 231 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 EHMT1Q9H9B1 1298 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 BMP2KQ9NSY1 1161 aaPredicted RBP12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 CAPN6Q9Y6Q1 641 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 F5H6K3 240 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 CCNT1O60563 726 aaKnown RBP12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 USO1O60763 962 aaKnown RBP12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 KLK7P49862 253 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 KLRC3Q07444 240 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 TROAPQ12815 778 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 TCERG1LQ5VWI1 586 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 CREG2Q8IUH2 290 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 SRBD1Q8N5C6 995 aaKnown RBP12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 ZNF341Q9BYN7 854 aa12.28□□□□□ -0.44
RPRD1B-201ENST00000373433 NCK2O43639 380 aa12.27□□□□□ -0.44
RPRD1B-201ENST00000373433 PTGISQ16647 500 aa12.27□□□□□ -0.44
RPRD1B-201ENST00000373433 INF2Q27J81 1249 aa12.27□□□□□ -0.44
RPRD1B-201ENST00000373433 DTHD1Q6ZMT9 781 aa12.27□□□□□ -0.44
RPRD1B-201ENST00000373433 MMGT1Q8N4V1 131 aa12.27□□□□□ -0.44
RPRD1B-201ENST00000373433 WRNIP1Q96S55 665 aa12.27□□□□□ -0.44
RPRD1B-201ENST00000373433 VPS33BQ9H267 617 aa12.27□□□□□ -0.44
RPRD1B-201ENST00000373433 PSTPIP2Q9H939 334 aa12.27□□□□□ -0.44
RPRD1B-201ENST00000373433 BCCIPQ9P287 314 aaKnown RBP eCLIP12.27□□□□□ -0.447e-6■■■■□ 19.3
RPRD1B-201ENST00000373433 WNK3Q9BYP7 1800 aa12.27□□□□□ -0.44
RPRD1B-201ENST00000373433 MYH10P35580 1976 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 ZSCAN5CA6NGD5 496 aaPredicted RBP12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 LRRC10BA6NIK2 292 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 FLOT1O75955 427 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 VIL1P09327 827 aaKnown RBP12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 GCFC2P16383 781 aaKnown RBP12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 PRCPP42785 496 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 KRT25Q7Z3Z0 450 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 DNAJC7Q99615 494 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 TACO1Q9BSH4 297 aaKnown RBP12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 AS3MTQ9HBK9 375 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 HAUS2Q9NVX0 235 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 GGA3Q9NZ52 723 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 STK36Q9NRP7 1315 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 GOLGA6L10A6NI86 522 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 WNT10BO00744 389 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 RNASE9P60153 205 aaKnown RBP12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 GUCY2DQ02846 1103 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 SF3A3Q12874 501 aaKnown RBP eCLIP12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 EARS2Q5JPH6 523 aaKnown RBP12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 SH3RF1Q7Z6J0 888 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 FBXO11Q86XK2 927 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 TRIM58Q8NG06 486 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 IFIH1Q9BYX4 1025 aaKnown RBP12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 TAF1P21675 1872 aa12.27□□□□□ -0.45
RPRD1B-201ENST00000373433 COL1A1P02452 1464 aaPredicted RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 LGALS16A8MUM7 142 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 SLURP2P0DP57 97 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 EPB41P11171 864 aaKnown RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 BRD2P25440 801 aaKnown RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 CARSP49589 748 aaKnown RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 TBC1D8BQ0IIM8 1120 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 GRM4Q14833 912 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 SEC23AQ15436 765 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 C9orf131Q5VYM1 1079 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 TYW1BQ6NUM6 668 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 PARP9Q8IXQ6 854 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 OSBPL9Q96SU4 736 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 EPB41L5Q9HCM4 733 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 KCNG1Q9UIX4 513 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 CAPN11Q9UMQ6 739 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 A0A1B0GUA9 196 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 CCDC189A1A4V9 331 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 SKAP2O75563 359 aaPredicted RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 DDNO94850 711 aaPredicted RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 FAM153BP0C7A2 387 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 SNAP25P60880 206 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 FKBP1AP62942 108 aaKnown RBP12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 FAM153CQ494X1 144 aa12.26□□□□□ -0.45
RPRD1B-201ENST00000373433 ODF2Q5BJF6 829 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms