RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 GSPT2Q8IYD1 628 aaKnown RBP26.33■■□□□ 1.81
CDK9-201ENST00000373264 ACER1Q8TDN7 264 aa26.33■■□□□ 1.81
CDK9-201ENST00000373264 SH2D4AQ9H788 454 aa26.33■■□□□ 1.81
CDK9-201ENST00000373264 MSH4O15457 936 aa26.33■■□□□ 1.81
CDK9-201ENST00000373264 NCK2O43639 380 aa26.33■■□□□ 1.81
CDK9-201ENST00000373264 POLR2FP61218 127 aaKnown RBP26.33■■□□□ 1.81
CDK9-201ENST00000373264 UBXN2AP68543 259 aa26.33■■□□□ 1.81
CDK9-201ENST00000373264 REEP2Q9BRK0 252 aa26.33■■□□□ 1.81
CDK9-201ENST00000373264 RGL1Q9NZL6 768 aa26.33■■□□□ 1.81
CDK9-201ENST00000373264 SERPINA10Q9UK55 444 aa26.33■■□□□ 1.81
CDK9-201ENST00000373264 BMP3P12645 472 aa26.32■■□□□ 1.8
CDK9-201ENST00000373264 HOXD13P35453 343 aa26.32■■□□□ 1.8
CDK9-201ENST00000373264 RASSF7Q02833 373 aa26.32■■□□□ 1.8
CDK9-201ENST00000373264 ABCB11O95342 1321 aa26.32■■□□□ 1.8
CDK9-201ENST00000373264 SPDYE3A6NKU9 549 aa26.32■■□□□ 1.8
CDK9-201ENST00000373264 EML1O00423 815 aa26.32■■□□□ 1.8
CDK9-201ENST00000373264 PLSCR1O15162 318 aa26.32■■□□□ 1.8
CDK9-201ENST00000373264 KIF20AO95235 890 aa26.32■■□□□ 1.8
CDK9-201ENST00000373264 GIT2Q14161 759 aa26.32■■□□□ 1.8
CDK9-201ENST00000373264 SFR1Q86XK3 245 aa26.32■■□□□ 1.8
CDK9-201ENST00000373264 BUB1O43683 1085 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 USP14P54578 494 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 ADAM9Q13443 819 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 ASTE1Q2TB18 679 aaPredicted RBP26.31■■□□□ 1.8
CDK9-201ENST00000373264 TDRD12Q587J7 1177 aaKnown RBP26.31■■□□□ 1.8
CDK9-201ENST00000373264 FAM83BQ5T0W9 1011 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 TRIM59Q8IWR1 403 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 GMCL1P1Q8NEA9 526 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 CAGE1Q8TC20 777 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 MRIQ9BWK5 157 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 PRR12Q9ULL5 1215 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 LRRIQ3A6PVS8 624 aaPredicted RBP26.31■■□□□ 1.8
CDK9-201ENST00000373264 SFI1A8K8P3 1242 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 POTEB2H3BUK9 544 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 ZBTB39O15060 712 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 MYBP10242 640 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 KCNA1Q09470 495 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 AP3B2Q13367 1082 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 RBM26Q5T8P6 1007 aaKnown RBP26.31■■□□□ 1.8
CDK9-201ENST00000373264 NFRKBQ6P4R8 1299 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 SLFN12Q8IYM2 578 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 EHBP1Q8NDI1 1231 aa26.31■■□□□ 1.8
CDK9-201ENST00000373264 PRPF6O94906 941 aaKnown RBP26.3■■□□□ 1.8
CDK9-201ENST00000373264 ACTN1P12814 892 aa26.3■■□□□ 1.8
CDK9-201ENST00000373264 GMCL1Q96IK5 515 aa26.3■■□□□ 1.8
CDK9-201ENST00000373264 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.3■■□□□ 1.8
CDK9-201ENST00000373264 MAGEA1P43355 309 aa26.3■■□□□ 1.8
CDK9-201ENST00000373264 EZH2Q15910 746 aaKnown RBP26.3■■□□□ 1.8
CDK9-201ENST00000373264 ZYXQ15942 572 aaKnown RBP26.3■■□□□ 1.8
CDK9-201ENST00000373264 RUSC1Q9BVN2 902 aa26.3■■□□□ 1.8
CDK9-201ENST00000373264 MYBL2P10244 700 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 SREBF1P36956 1147 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 HDLBPQ00341 1268 aaKnown RBP26.29■■□□□ 1.8
CDK9-201ENST00000373264 CASP8Q14790 479 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 HDXQ7Z353 690 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 DNAAF5Q86Y56 855 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 BHMT2Q9H2M3 363 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 FRMD3A2A2Y4 597 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 C21orf2O43822 256 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 LCA5LO95447 670 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 NR2F2P24468 414 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 CREG2Q8IUH2 290 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 C7orf43Q8WVR3 580 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 NAP1L4Q99733 375 aaKnown RBP26.29■■□□□ 1.8
CDK9-201ENST00000373264 GLT8D2Q9H1C3 349 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 VAV3Q9UKW4 847 aa26.29■■□□□ 1.8
CDK9-201ENST00000373264 Q4G0T1 1027 aa26.28■■□□□ 1.8
CDK9-201ENST00000373264 CCDC174Q6PII3 467 aa26.28■■□□□ 1.8
CDK9-201ENST00000373264 PIGOQ8TEQ8 1089 aa26.28■■□□□ 1.8
CDK9-201ENST00000373264 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.28■■□□□ 1.8
CDK9-201ENST00000373264 SCAF8Q9UPN6 1271 aaKnown RBP26.28■■□□□ 1.8
CDK9-201ENST00000373264 CHMP2AO43633 222 aa26.28■■□□□ 1.8
CDK9-201ENST00000373264 ERLIN1O75477 346 aa26.28■■□□□ 1.8
CDK9-201ENST00000373264 SNX12Q9UMY4 172 aa26.28■■□□□ 1.8
CDK9-201ENST00000373264 PPIP5K2O43314 1243 aa26.27■■□□□ 1.8
CDK9-201ENST00000373264 USO1O60763 962 aaKnown RBP26.27■■□□□ 1.8
CDK9-201ENST00000373264 CFBP00751 764 aa26.27■■□□□ 1.8
CDK9-201ENST00000373264 RPA1P27694 616 aa26.27■■□□□ 1.8
CDK9-201ENST00000373264 CYP2C19P33261 490 aa26.27■■□□□ 1.8
CDK9-201ENST00000373264 CTTNQ14247 550 aaKnown RBP26.27■■□□□ 1.8
CDK9-201ENST00000373264 HAUS3Q68CZ6 603 aa26.27■■□□□ 1.8
CDK9-201ENST00000373264 HDAC7Q8WUI4 952 aa26.27■■□□□ 1.8
CDK9-201ENST00000373264 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.27■■□□□ 1.8
CDK9-201ENST00000373264 DNM3Q9UQ16 869 aa26.27■■□□□ 1.8
CDK9-201ENST00000373264 STYK1Q6J9G0 422 aa26.27■■□□□ 1.8
CDK9-201ENST00000373264 CEP63Q96MT8 703 aa26.27■■□□□ 1.8
CDK9-201ENST00000373264 WDR18Q9BV38 432 aa26.27■■□□□ 1.8
CDK9-201ENST00000373264 SRCAPQ6ZRS2 3230 aa26.27■■□□□ 1.8
CDK9-201ENST00000373264 ANO9A1A5B4 782 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 PHACTR2O75167 634 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 RAD17O75943 681 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 ZNF76P36508 570 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 MATR3P43243 847 aaKnown RBP eCLIP26.26■■□□□ 1.79
CDK9-201ENST00000373264 DNA2P51530 1060 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 FKBP1AP62942 108 aaKnown RBP26.26■■□□□ 1.79
CDK9-201ENST00000373264 KCNH2Q12809 1159 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 RAPGEF1Q13905 1077 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 WDR93Q6P2C0 686 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 FAM133AQ8N9E0 248 aa26.26■■□□□ 1.79
CDK9-201ENST00000373264 SYT2Q8N9I0 419 aaPredicted RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms