RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 PCDHA11Q9Y5I1 949 aa17.16■□□□□ 0.34
C9orf16-201ENST00000372994 CYP46A1Q9Y6A2 500 aa17.16■□□□□ 0.34
C9orf16-201ENST00000372994 MEIS1O00470 390 aa17.15■□□□□ 0.34
C9orf16-201ENST00000372994 NBNO60934 754 aa17.15■□□□□ 0.34
C9orf16-201ENST00000372994 GNAT1P11488 350 aa17.15■□□□□ 0.34
C9orf16-201ENST00000372994 TCF7P36402 384 aaPredicted RBP17.15■□□□□ 0.34
C9orf16-201ENST00000372994 RABGGTBP53611 331 aa17.15■□□□□ 0.34
C9orf16-201ENST00000372994 UTP14CQ5TAP6 766 aaKnown RBP17.15■□□□□ 0.34
C9orf16-201ENST00000372994 PGBD1Q96JS3 809 aa17.15■□□□□ 0.34
C9orf16-201ENST00000372994 RNF26Q9BY78 433 aaPredicted RBP17.15■□□□□ 0.34
C9orf16-201ENST00000372994 SETD4Q9NVD3 440 aa17.15■□□□□ 0.34
C9orf16-201ENST00000372994 TMEM260Q9NX78 707 aa17.15■□□□□ 0.34
C9orf16-201ENST00000372994 YBX2Q9Y2T7 364 aaKnown RBP17.15■□□□□ 0.34
C9orf16-201ENST00000372994 TREHO43280 583 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 MBTPS1Q14703 1052 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 MCTP2Q6DN12 878 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 CNKSR3Q6P9H4 555 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 CCDC12Q8WUD4 166 aaPredicted RBP17.14■□□□□ 0.33
C9orf16-201ENST00000372994 CRYGNQ8WXF5 182 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 PHKBQ93100 1093 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 ZNF274Q96GC6 653 aaPredicted RBP17.14■□□□□ 0.33
C9orf16-201ENST00000372994 SLC9A7Q96T83 725 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 NKX2-4Q9H2Z4 354 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 SLC28A3Q9HAS3 691 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 C6orf50Q9HD87 102 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 NFASCO94856 1347 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 NRCAMQ92823 1304 aa17.14■□□□□ 0.33
C9orf16-201ENST00000372994 CAND2O75155 1236 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 CYP3A4P08684 503 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 ARP10275 920 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 FOSL2P15408 326 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 GNA11P29992 359 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 THPOP40225 353 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 CCT2P78371 535 aaKnown RBP17.13■□□□□ 0.33
C9orf16-201ENST00000372994 ARHGAP4P98171 946 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 AKAP17AQ02040 695 aaKnown RBP17.13■□□□□ 0.33
C9orf16-201ENST00000372994 JAKMIP3Q5VZ66 844 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 NIPA1Q7RTP0 329 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 UPF3BQ9BZI7 483 aaKnown RBP17.13■□□□□ 0.33
C9orf16-201ENST00000372994 SMARCAD1Q9H4L7 1026 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 NCOA5Q9HCD5 579 aaKnown RBP17.13■□□□□ 0.33
C9orf16-201ENST00000372994 JPH1Q9HDC5 661 aaPredicted RBP17.13■□□□□ 0.33
C9orf16-201ENST00000372994 ERAP1Q9NZ08 941 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 PKD2L1Q9P0L9 805 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 SLC9A2Q9UBY0 812 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 EMSYQ7Z589 1322 aa17.13■□□□□ 0.33
C9orf16-201ENST00000372994 ABHD14A-ACY1A0A1B0GW23 586 aa17.12■□□□□ 0.33
C9orf16-201ENST00000372994 RSPH10B2B2RC85 870 aa17.12■□□□□ 0.33
C9orf16-201ENST00000372994 ADAMTS3O15072 1205 aa17.12■□□□□ 0.33
C9orf16-201ENST00000372994 RSPH10BP0C881 870 aa17.12■□□□□ 0.33
C9orf16-201ENST00000372994 MYOGP15173 224 aa17.12■□□□□ 0.33
C9orf16-201ENST00000372994 HERC6Q8IVU3 1022 aa17.12■□□□□ 0.33
C9orf16-201ENST00000372994 REXO1Q8N1G1 1221 aaKnown RBP17.12■□□□□ 0.33
C9orf16-201ENST00000372994 MAFAQ8NHW3 353 aaPredicted RBP17.12■□□□□ 0.33
C9orf16-201ENST00000372994 LMBR1Q8WVP7 490 aa17.12■□□□□ 0.33
C9orf16-201ENST00000372994 SLC26A6Q9BXS9 759 aa17.12■□□□□ 0.33
C9orf16-201ENST00000372994 AGO4Q9HCK5 861 aaKnown RBP17.12■□□□□ 0.33
C9orf16-201ENST00000372994 CUL9Q8IWT3 2517 aa17.11■□□□□ 0.33
C9orf16-201ENST00000372994 FAM86B1E9PN63 330 aa17.11■□□□□ 0.33
C9orf16-201ENST00000372994 EFCAB14O75071 495 aa17.11■□□□□ 0.33
C9orf16-201ENST00000372994 LGR5O75473 907 aa17.11■□□□□ 0.33
C9orf16-201ENST00000372994 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
C9orf16-201ENST00000372994 FAM86B2P0C5J1 330 aa17.11■□□□□ 0.33
C9orf16-201ENST00000372994 WDR5P61964 334 aaKnown RBP17.11■□□□□ 0.33
C9orf16-201ENST00000372994 ITGB3BPQ13352 177 aaPredicted RBP17.11■□□□□ 0.33
C9orf16-201ENST00000372994 TCTN1Q2MV58 587 aa17.11■□□□□ 0.33
C9orf16-201ENST00000372994 GLG1Q92896 1179 aa17.11■□□□□ 0.33
C9orf16-201ENST00000372994 PCYT2Q99447 389 aa17.11■□□□□ 0.33
C9orf16-201ENST00000372994 SDF4Q9BRK5 362 aa17.11■□□□□ 0.33
C9orf16-201ENST00000372994 PRDM12Q9H4Q4 367 aa17.11■□□□□ 0.33
C9orf16-201ENST00000372994 SH3GLB2Q9NR46 395 aa17.11■□□□□ 0.33
C9orf16-201ENST00000372994 IGLV3-22A0A075B6J6 115 aa17.1■□□□□ 0.33
C9orf16-201ENST00000372994 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
C9orf16-201ENST00000372994 ATG7O95352 703 aa17.1■□□□□ 0.33
C9orf16-201ENST00000372994 ZNF76P36508 570 aa17.1■□□□□ 0.33
C9orf16-201ENST00000372994 KCNJ6P48051 423 aa17.1■□□□□ 0.33
C9orf16-201ENST00000372994 ACTR2P61160 394 aa17.1■□□□□ 0.33
C9orf16-201ENST00000372994 IKBKEQ14164 716 aa17.1■□□□□ 0.33
C9orf16-201ENST00000372994 RPAINQ86UA6 219 aa17.1■□□□□ 0.33
C9orf16-201ENST00000372994 CCDC148Q8NFR7 591 aa17.1■□□□□ 0.33
C9orf16-201ENST00000372994 BICD2Q8TD16 824 aa17.1■□□□□ 0.33
C9orf16-201ENST00000372994 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
C9orf16-201ENST00000372994 PTPRSQ13332 1948 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 VCANP13611 3396 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 MBLAC1A4D2B0 266 aaPredicted RBP17.09■□□□□ 0.33
C9orf16-201ENST00000372994 KIF28PB7ZC32 967 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 CA3P07451 260 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 MARK3P27448 753 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 ANAPC15P60006 121 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 SSRP1Q08945 709 aaKnown RBP17.09■□□□□ 0.33
C9orf16-201ENST00000372994 PPFIA1Q13136 1202 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 MKRN4PQ13434 485 aaPredicted RBP17.09■□□□□ 0.33
C9orf16-201ENST00000372994 PLEKHG4Q58EX7 1191 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 FAM26DQ5JW98 314 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 PPP2R2DQ66LE6 453 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 TAF2Q6P1X5 1199 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 PLPPR4Q7Z2D5 763 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 PLA2G4DQ86XP0 818 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 TRIM22Q8IYM9 498 aa17.09■□□□□ 0.33
C9orf16-201ENST00000372994 DBF4BQ8NFT6 615 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms