RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 ERVK-9P63128 1117 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 ERVK-24P63145 666 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 PDE4DQ08499 809 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 SPIRE1Q08AE8 756 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 TBX2Q13207 712 aaPredicted RBP14.46□□□□□ -0.09
LDB3-203ENST00000372056 STIM1Q13586 685 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 KCTD2Q14681 263 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 TPD52L1Q16890 204 aaPredicted RBP14.46□□□□□ -0.09
LDB3-203ENST00000372056 NCAPG2Q86XI2 1143 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 NEK9Q8TD19 979 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 BRI3BPQ8WY22 251 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 TBC1D5Q92609 795 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 GPRASP2Q96D09 838 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 CTAGE1Q96RT6 745 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 PDCD2LQ9BRP1 358 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 MOV10L1Q9BXT6 1211 aaKnown RBP14.46□□□□□ -0.09
LDB3-203ENST00000372056 A1CFQ9NQ94 594 aaKnown RBP14.46□□□□□ -0.09
LDB3-203ENST00000372056 JADE2Q9NQC1 790 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 BTBD7Q9P203 1132 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 RBPJLQ9UBG7 517 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 UBIAD1Q9Y5Z9 338 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 SMCHD1A6NHR9 2005 aa14.46□□□□□ -0.09
LDB3-203ENST00000372056 IGLV3-22A0A075B6J6 115 aa14.46□□□□□ -0.1
LDB3-203ENST00000372056 PSMA7O14818 248 aa14.46□□□□□ -0.1
LDB3-203ENST00000372056 ALDH1A1P00352 501 aa14.46□□□□□ -0.1
LDB3-203ENST00000372056 SLC10A3P09131 477 aa14.46□□□□□ -0.1
LDB3-203ENST00000372056 CCT6AP40227 531 aaKnown RBP14.46□□□□□ -0.1
LDB3-203ENST00000372056 PGM5Q15124 567 aa14.46□□□□□ -0.1
LDB3-203ENST00000372056 SPECC1LQ69YQ0 1117 aa14.46□□□□□ -0.1
LDB3-203ENST00000372056 KCNV1Q6PIU1 500 aa14.46□□□□□ -0.1
LDB3-203ENST00000372056 VSIG10LQ86VR7 867 aa14.46□□□□□ -0.1
LDB3-203ENST00000372056 RASAL3Q86YV0 1011 aa14.46□□□□□ -0.1
LDB3-203ENST00000372056 PVALEFA0A1B0GWK0 134 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 POTEB2H3BUK9 544 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 FCER1AP12319 257 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 PMS1P54277 932 aaKnown RBP14.45□□□□□ -0.1
LDB3-203ENST00000372056 SPAG1Q07617 926 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 STXBP2Q15833 593 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 PTPN21Q16825 1174 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 FAM110CQ1W6H9 321 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 GLIPR1L2Q4G1C9 344 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 COBLL1Q53SF7 1204 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 SLC5A5Q92911 643 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 DHTKD1Q96HY7 919 aaPredicted RBP14.45□□□□□ -0.1
LDB3-203ENST00000372056 UIMC1Q96RL1 719 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 PAGR1Q9BTK6 254 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 SLC5A4Q9NY91 659 aa14.45□□□□□ -0.1
LDB3-203ENST00000372056 LIMA1Q9UHB6 759 aaKnown RBP14.45□□□□□ -0.1
LDB3-203ENST00000372056 LRRC10BA6NIK2 292 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 MSH4O15457 936 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 EIF3JO75822 258 aaKnown RBP14.44□□□□□ -0.1
LDB3-203ENST00000372056 NR3C2P08235 984 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 ERCC3P19447 782 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 MAPK4P31152 587 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 STK4Q13043 487 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 PPP2R5CQ13362 524 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 UNC13DQ70J99 1090 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 RDM1Q8NG50 284 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 TAAR1Q96RJ0 339 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 ZNF577Q9BSK1 485 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 TEKT3Q9BXF9 490 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 TRIM49BA6NDI0 452 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 CNMDO75829 334 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 TPM2P07951 284 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 TGFB3P10600 412 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 PBX1P40424 430 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 PPP1R2P41236 205 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 KCNJ6P48051 423 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 MTMR1Q13613 665 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 KRT31Q15323 416 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 TCP11X2Q5H9J9 407 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 DNTTIP2Q5QJE6 756 aaKnown RBP14.44□□□□□ -0.1
LDB3-203ENST00000372056 TTI2Q6NXR4 508 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 SLC30A10Q6XR72 485 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 IRF2BP1Q8IU81 584 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 KIAA0895Q8NCT3 520 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 CYP2W1Q8TAV3 490 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 KCND1Q9NSA2 647 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 IVNS1ABPQ9Y6Y0 642 aa14.44□□□□□ -0.1
LDB3-203ENST00000372056 POTEB3A0JP26 581 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 IPO5O00410 1097 aaKnown RBP14.43□□□□□ -0.1
LDB3-203ENST00000372056 DKC1O60832 514 aaKnown RBP eCLIP14.43□□□□□ -0.1
LDB3-203ENST00000372056 GAS7O60861 476 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 SFNP31947 248 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 FILIP1LQ4L180 1135 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 LRCH2Q5VUJ6 765 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 POTEBQ6S5H4 581 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 CCDC112Q8NEF3 446 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 DDX12PQ92771 950 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 MMP19Q99542 508 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 POLR3CQ9BUI4 534 aaPredicted RBP14.43□□□□□ -0.1
LDB3-203ENST00000372056 TMX1Q9H3N1 280 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 TUFT1Q9NNX1 390 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 COL20A1Q9P218 1284 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 VAV3Q9UKW4 847 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 KIAA1024Q9UPX6 916 aa14.43□□□□□ -0.1
LDB3-203ENST00000372056 DIS3Q9Y2L1 958 aaKnown RBP14.43□□□□□ -0.1
LDB3-203ENST00000372056 R3HCC1Q9Y3T6 440 aaKnown RBP14.43□□□□□ -0.1
LDB3-203ENST00000372056 ASB14A6NK59 587 aa14.42□□□□□ -0.1
LDB3-203ENST00000372056 KCNJ18B7U540 433 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms