RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 RSRC2Q7L4I2 434 aaKnown RBP11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 LDHDQ86WU2 507 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 VSTM4Q8IW00 320 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 RAD54LQ92698 747 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 FAM20AQ96MK3 541 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 P2RX7Q99572 595 aaKnown RBP11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 SLF1Q9BQI6 1058 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 BLOC1S4Q9NUP1 217 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 FAM170AA1A519 330 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 PSMA7O14818 248 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 CYP3A4P08684 503 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 INPP5BP32019 993 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 SPAG1Q07617 926 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 ADSSL1Q8N142 457 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 GIMAP8Q8ND71 665 aaPredicted RBP11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 MAPK8IP1Q9UQF2 711 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 STK24Q9Y6E0 443 aa11.05□□□□□ -0.64
PRPF38B-203ENST00000370025 HNRNPH1P31943 449 aaKnown RBP11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 TMEM119Q4V9L6 283 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 CNNM4Q6P4Q7 775 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 ERMNQ8TAM6 284 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 GJA10Q969M2 543 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 NUDT12Q9BQG2 462 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 AS3MTQ9HBK9 375 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 PICK1Q9NRD5 415 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 CTDP1Q9Y5B0 961 aaPredicted RBP11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 SMCHD1A6NHR9 2005 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 SSBP05455 408 aaKnown RBP eCLIP11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 CDKAL1Q5VV42 579 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 NCAPH2Q6IBW4 605 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 TANGO6Q9C0B7 1094 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 PSD3Q9NYI0 1048 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 CCPG1Q9ULG6 757 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 PVALEFA0A1B0GWK0 134 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 MAP2K7O14733 419 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 ABL1P00519 1130 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 ICAM1P05362 532 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 HAUS3Q68CZ6 603 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 EFCAB13Q8IY85 973 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 SCYL3Q8IZE3 742 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 NOA1Q8NC60 698 aaKnown RBP11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 GIMAP7Q8NHV1 300 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 ETNPPLQ8TBG4 499 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 AFAP1L1Q8TED9 768 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 DHTKD1Q96HY7 919 aaPredicted RBP11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 CAPZA3Q96KX2 299 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 UIMC1Q96RL1 719 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 BMP2KQ9NSY1 1161 aaPredicted RBP11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 CAPN7Q9Y6W3 813 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 SRCAPQ6ZRS2 3230 aa11.04□□□□□ -0.64
PRPF38B-203ENST00000370025 FAM86B1E9PN63 330 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 ARHGAP6O43182 974 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 FAM86B2P0C5J1 330 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 HYIQ5T013 277 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 TRPM4Q8TD43 1214 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 TBC1D5Q92609 795 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 WRNIP1Q96S55 665 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 FAM107BQ9H098 131 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 PPP2R3BQ9Y5P8 575 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 MYMKA6NI61 221 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 MYO1FO00160 1098 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 HOXA7P31268 230 aaPredicted RBP11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 DNA2P51530 1060 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 BRD3Q15059 726 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 UNC13DQ70J99 1090 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 SRGAP1Q7Z6B7 1085 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 CD248Q9HCU0 757 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 GGA3Q9NZ52 723 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 ZNF112Q9UJU3 913 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 PNMA2Q9UL42 364 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 A0A1B0GTH6 734 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 PPFIA4O75335 1185 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 FLOT1O75955 427 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 SPP2Q13103 211 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 MTMR2Q13614 643 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 NR1I3Q14994 352 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 GBP6Q6ZN66 633 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 WDR18Q9BV38 432 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 L1RE1Q9UN81 338 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 KIAA1024Q9UPX6 916 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 FAM169AQ9Y6X4 670 aa11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 DICER1Q9UPY3 1922 aaKnown RBP11.03□□□□□ -0.64
PRPF38B-203ENST00000370025 BICDL2A1A5D9 508 aa11.02□□□□□ -0.64
PRPF38B-203ENST00000370025 ENC1O14682 589 aa11.02□□□□□ -0.64
PRPF38B-203ENST00000370025 SUPT20HL1Q3ZLR7 823 aa11.02□□□□□ -0.64
PRPF38B-203ENST00000370025 SPECC1LQ69YQ0 1117 aa11.02□□□□□ -0.64
PRPF38B-203ENST00000370025 DYMQ7RTS9 669 aa11.02□□□□□ -0.64
PRPF38B-203ENST00000370025 MCF2L2Q86YR7 1114 aa11.02□□□□□ -0.64
PRPF38B-203ENST00000370025 BCAS4Q8TDM0 211 aa11.02□□□□□ -0.64
PRPF38B-203ENST00000370025 LENG9Q96B70 501 aa11.02□□□□□ -0.64
PRPF38B-203ENST00000370025 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.64
PRPF38B-203ENST00000370025 FHDC1Q9C0D6 1143 aaPredicted RBP11.02□□□□□ -0.64
PRPF38B-203ENST00000370025 INTS13Q9NVM9 706 aa11.02□□□□□ -0.64
PRPF38B-203ENST00000370025 A0A087WUV0 522 aaPredicted RBP11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 EBAG9O00559 213 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 MSH4O15457 936 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 KIF5CO60282 957 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 IDEP14735 1019 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 EPS15P42566 896 aa11.02□□□□□ -0.65
PRPF38B-203ENST00000370025 PRAMEF18Q5VWM3 479 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms