RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 HDAC4P56524 1084 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 ZBED6P86452 979 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 DDHD1Q8NEL9 900 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 SIRT1Q96EB6 747 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 PAWRQ96IZ0 340 aaKnown RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 PBKQ96KB5 322 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 NR1H4Q96RI1 486 aaPredicted RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 C14orf93Q9H972 538 aaKnown RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 MRPL44Q9H9J2 332 aaKnown RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 ADAMTS1Q9UHI8 967 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 PCDHA13Q9Y5I0 950 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 MAP3K4Q9Y6R4 1608 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 SGK1O00141 431 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 SMAPO00193 183 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 IGF2BP3O00425 579 aaKnown RBP eCLIP9.23□□□□□ -0.93
LCA5-201ENST00000369846 FGGP02679 453 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 SLC39A14Q15043 492 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 BBS9Q3SYG4 887 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 ZCWPW2Q504Y3 356 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 E4F1Q66K89 784 aaPredicted RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 APOA5Q6Q788 366 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 CRLF3Q8IUI8 442 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 MIEF2Q96C03 454 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 OPTNQ96CV9 577 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 NMD3Q96D46 503 aaKnown RBP9.23□□□□□ -0.93
LCA5-201ENST00000369846 BTBD6Q96KE9 485 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 NT5C3AQ9H0P0 336 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 ADGRG1Q9Y653 693 aa9.23□□□□□ -0.93
LCA5-201ENST00000369846 PDHBP11177 359 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 SCG2P13521 617 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 CYP2J2P51589 502 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 SLC12A1Q13621 1099 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 TRIP10Q15642 601 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 GLE1Q53GS7 698 aaKnown RBP9.22□□□□□ -0.93
LCA5-201ENST00000369846 TTBK2Q6IQ55 1244 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 TRPM8Q7Z2W7 1104 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 SPATA21Q7Z572 469 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 ANKLE2Q86XL3 938 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 CATSPER3Q86XQ3 398 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 MYCT1Q8N699 235 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 DDX47Q9H0S4 455 aaKnown RBP9.22□□□□□ -0.93
LCA5-201ENST00000369846 GID8Q9NWU2 228 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 ARHGAP26Q9UNA1 814 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 TRIM16O95361 564 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 ESRRBO95718 433 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 SMTNP53814 917 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 SLC20A2Q08357 652 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 RARS2Q5T160 578 aaKnown RBP9.22□□□□□ -0.93
LCA5-201ENST00000369846 EPM2AIP1Q7L775 607 aaPredicted RBP9.22□□□□□ -0.93
LCA5-201ENST00000369846 RFWD2Q8NHY2 731 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 CDKL2Q92772 493 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 ARL2BPQ9Y2Y0 163 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 SHROOM2Q13796 1616 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 MAGEB6P1A0A0J9YX57 407 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 GPAA1O43292 621 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 PLS3P13797 630 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 IQCB1Q15051 598 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
LCA5-201ENST00000369846 NFRKBQ6P4R8 1299 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 RAPH1Q70E73 1250 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 BZW1Q7L1Q6 419 aaKnown RBP9.22□□□□□ -0.93
LCA5-201ENST00000369846 HDDC2Q7Z4H3 204 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 ARHGEF25Q86VW2 580 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 SMCR8Q8TEV9 937 aaPredicted RBP9.22□□□□□ -0.93
LCA5-201ENST00000369846 FBXL5Q9UKA1 691 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 MAN1B1Q9UKM7 699 aa9.22□□□□□ -0.93
LCA5-201ENST00000369846 EXOC5O00471 708 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 CDC25CP30307 473 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 ECE1P42892 770 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 KDSRQ06136 332 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 Q4G0T1 1027 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 PCGF5Q86SE9 256 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 RNF217Q8TC41 542 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 SYMPKQ92797 1274 aaKnown RBP9.21□□□□□ -0.93
LCA5-201ENST00000369846 KIFC3Q9BVG8 833 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 IL25Q9H293 177 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 PDP2Q9P2J9 529 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 APOBEC2Q9Y235 224 aaKnown RBP9.21□□□□□ -0.93
LCA5-201ENST00000369846 CCT8L1PA6NM43 557 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 ADAMTS2O95450 1211 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 GNA14O95837 355 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 HSPA8P11142 646 aaKnown RBP9.21□□□□□ -0.93
LCA5-201ENST00000369846 MTF1Q14872 753 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 NONOQ15233 471 aaKnown RBP eCLIP9.21□□□□□ -0.93
LCA5-201ENST00000369846 EXOC3L4Q17RC7 722 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 PPM1KQ8N3J5 372 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 ERP27Q96DN0 273 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 TRIM11Q96F44 468 aa9.21□□□□□ -0.93
LCA5-201ENST00000369846 MROH2AA6NES4 1674 aa9.21□□□□□ -0.94
LCA5-201ENST00000369846 GOLGA8QA0A0J9YX86 632 aa9.21□□□□□ -0.94
LCA5-201ENST00000369846 GOLGA8OA6NCC3 632 aa9.21□□□□□ -0.94
LCA5-201ENST00000369846 GOLGA8NF8WBI6 632 aa9.21□□□□□ -0.94
LCA5-201ENST00000369846 CCDC188H7C350 402 aa9.21□□□□□ -0.94
LCA5-201ENST00000369846 HLA-DPA1P20036 260 aa9.21□□□□□ -0.94
LCA5-201ENST00000369846 ABCD1P33897 745 aa9.21□□□□□ -0.94
LCA5-201ENST00000369846 MRPL12P52815 198 aaKnown RBP9.21□□□□□ -0.94
LCA5-201ENST00000369846 OCRLQ01968 901 aa9.21□□□□□ -0.94
LCA5-201ENST00000369846 ADAM9Q13443 819 aa9.21□□□□□ -0.94
LCA5-201ENST00000369846 HAUS3Q68CZ6 603 aa9.21□□□□□ -0.94
LCA5-201ENST00000369846 ARMCX5Q6P1M9 558 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms