RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 ZSCAN9O15535 394 aaPredicted RBP11.25□□□□□ -0.61
PRDM1-201ENST00000369089 KRT7P08729 469 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 OCM2P0CE71 109 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 OCMP0CE72 109 aaPredicted RBP11.25□□□□□ -0.61
PRDM1-201ENST00000369089 CALB2P22676 271 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 KRT81Q14533 505 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 G2E3Q7L622 706 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 KCTD17Q8N5Z5 321 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 SPATA4Q8NEY3 305 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 DACT3Q96B18 629 aaPredicted RBP11.25□□□□□ -0.61
PRDM1-201ENST00000369089 RILPQ96NA2 401 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 ZFP69BQ9UJL9 534 aa11.25□□□□□ -0.61
PRDM1-201ENST00000369089 FLT3P36888 993 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 LDHAL6AQ6ZMR3 332 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 PEX26Q7Z412 305 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 C2CD5Q86YS7 1000 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 SYCE1Q8N0S2 351 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 SYT2Q8N9I0 419 aaPredicted RBP11.24□□□□□ -0.61
PRDM1-201ENST00000369089 GDAP1Q8TB36 358 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 RAPGEF5Q92565 580 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 POLR3CQ9BUI4 534 aaPredicted RBP11.24□□□□□ -0.61
PRDM1-201ENST00000369089 FAM129AQ9BZQ8 928 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 PCDH18Q9HCL0 1135 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 KCNJ18B7U540 433 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 SART1O43290 800 aaKnown RBP11.24□□□□□ -0.61
PRDM1-201ENST00000369089 CYTH3O43739 400 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 DAB1O75553 588 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 ATP1A1P05023 1023 aaKnown RBP11.24□□□□□ -0.61
PRDM1-201ENST00000369089 ALDH5A1P51649 535 aaPredicted RBP11.24□□□□□ -0.61
PRDM1-201ENST00000369089 BYSLQ13895 437 aaKnown RBP11.24□□□□□ -0.61
PRDM1-201ENST00000369089 KCNJ12Q14500 433 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 SEL1L2Q5TEA6 688 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 CFAP36Q96G28 342 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 FMO2Q99518 471 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 ZMYND12Q9H0C1 365 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 BHMT2Q9H2M3 363 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 HDAC9Q9UKV0 1011 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 GAS8O95995 478 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 NAT1P18440 290 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 HDAC4P56524 1084 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 TFAP4Q01664 338 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 MTF1Q14872 753 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.24□□□□□ -0.61
PRDM1-201ENST00000369089 SCAIQ8N9R8 606 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 TNIP2Q8NFZ5 429 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 TRIM55Q9BYV6 548 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 PCDHGA4Q9Y5G9 962 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 SFI1A8K8P3 1242 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 MATN2O00339 956 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 BUB1O43683 1085 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 ZPR1O75312 459 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 MCF2P10911 925 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 EPB41P11171 864 aaKnown RBP11.24□□□□□ -0.61
PRDM1-201ENST00000369089 DNM2P50570 870 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 B3GNT6Q6ZMB0 384 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 ERICH1Q86X53 443 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 DDI1Q8WTU0 396 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 STK32AQ8WU08 396 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 TRIM63Q969Q1 353 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 CROTQ9UKG9 612 aa11.24□□□□□ -0.61
PRDM1-201ENST00000369089 RNMTO43148 476 aaKnown RBP11.23□□□□□ -0.61
PRDM1-201ENST00000369089 POLR2EP19388 210 aaKnown RBP11.23□□□□□ -0.61
PRDM1-201ENST00000369089 COPB1P53618 953 aaKnown RBP11.23□□□□□ -0.61
PRDM1-201ENST00000369089 DSG1Q02413 1049 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 RESTQ13127 1097 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 CWF19L2Q2TBE0 894 aaKnown RBP11.23□□□□□ -0.61
PRDM1-201ENST00000369089 RASGRP2Q7LDG7 609 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 SAMD3Q8N6K7 520 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 RPAP3Q9H6T3 665 aaPredicted RBP11.23□□□□□ -0.61
PRDM1-201ENST00000369089 BCRP11274 1271 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 CHN1P15882 459 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 UBA7P41226 1012 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 TRPC1P48995 793 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 PEX5P50542 639 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 RASSF7Q02833 373 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 ASPHQ12797 758 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 RASGRF1Q13972 1273 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 PDIA5Q14554 519 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 KIF22Q14807 665 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 C1QTNF12Q5T7M4 302 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 C1orf146Q5VVC0 180 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 NRBF2Q96F24 287 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 YIPF2Q9BWQ6 316 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 CUEDC2Q9H467 287 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 DDX18Q9NVP1 670 aaKnown RBP11.23□□□□□ -0.61
PRDM1-201ENST00000369089 LEMD3Q9Y2U8 911 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 TRIM75PA6NK02 468 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 SLC26A4O43511 780 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 SLCO1A2P46721 670 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 GRIN1Q05586 938 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 C16orf72Q14CZ0 275 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 VWA3BQ502W6 1294 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 RNF220Q5VTB9 566 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 TUBA3EQ6PEY2 450 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 ZNF229Q9UJW7 825 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 MYOM2P54296 1465 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 ESYT3A0FGR9 886 aa11.23□□□□□ -0.61
PRDM1-201ENST00000369089 NDUFB5O43674 189 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms