RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 DYDC2Q96IM9 177 aa26.72■■□□□ 1.87
SNX3-203ENST00000368979 MPHOSPH6Q99547 160 aaKnown RBP26.72■■□□□ 1.87
SNX3-203ENST00000368979 RMND1Q9NWS8 449 aa26.72■■□□□ 1.87
SNX3-203ENST00000368979 NFASCO94856 1347 aa26.72■■□□□ 1.87
SNX3-203ENST00000368979 ZNFX1Q9P2E3 1918 aaKnown RBP26.71■■□□□ 1.87
SNX3-203ENST00000368979 STRNO43815 780 aa26.71■■□□□ 1.87
SNX3-203ENST00000368979 SREBF2Q12772 1141 aa26.71■■□□□ 1.87
SNX3-203ENST00000368979 DHX8Q14562 1220 aaKnown RBP26.71■■□□□ 1.87
SNX3-203ENST00000368979 KCNB1Q14721 858 aa26.71■■□□□ 1.87
SNX3-203ENST00000368979 MLKLQ8NB16 471 aa26.71■■□□□ 1.87
SNX3-203ENST00000368979 MORC4Q8TE76 937 aa26.71■■□□□ 1.87
SNX3-203ENST00000368979 LRRC27Q9C0I9 530 aa26.71■■□□□ 1.87
SNX3-203ENST00000368979 ZNF236Q9UL36 1845 aa26.71■■□□□ 1.87
SNX3-203ENST00000368979 MYMKA6NI61 221 aa26.7■■□□□ 1.87
SNX3-203ENST00000368979 PLA2G4BP0C869 781 aa26.7■■□□□ 1.87
SNX3-203ENST00000368979 KRT76Q01546 638 aa26.7■■□□□ 1.87
SNX3-203ENST00000368979 DHX40Q8IX18 779 aaKnown RBP26.7■■□□□ 1.87
SNX3-203ENST00000368979 PSMC6P62333 389 aa26.7■■□□□ 1.86
SNX3-203ENST00000368979 CTTNQ14247 550 aaKnown RBP26.7■■□□□ 1.86
SNX3-203ENST00000368979 GPR142Q7Z601 462 aa26.7■■□□□ 1.86
SNX3-203ENST00000368979 SENP7Q9BQF6 1050 aa26.7■■□□□ 1.86
SNX3-203ENST00000368979 CPA4Q9UI42 421 aa26.7■■□□□ 1.86
SNX3-203ENST00000368979 DNM3Q9UQ16 869 aa26.7■■□□□ 1.86
SNX3-203ENST00000368979 CCNE2O96020 404 aa26.69■■□□□ 1.86
SNX3-203ENST00000368979 ADORA2AP29274 412 aa26.69■■□□□ 1.86
SNX3-203ENST00000368979 MAPK4P31152 587 aa26.69■■□□□ 1.86
SNX3-203ENST00000368979 SFNP31947 248 aa26.69■■□□□ 1.86
SNX3-203ENST00000368979 JAK3P52333 1124 aa26.69■■□□□ 1.86
SNX3-203ENST00000368979 ZNF792Q3KQV3 632 aa26.69■■□□□ 1.86
SNX3-203ENST00000368979 KMT5BQ4FZB7 885 aa26.69■■□□□ 1.86
SNX3-203ENST00000368979 ZNF746Q6NUN9 644 aaPredicted RBP26.69■■□□□ 1.86
SNX3-203ENST00000368979 DACH1Q9UI36 760 aa26.69■■□□□ 1.86
SNX3-203ENST00000368979 IVNS1ABPQ9Y6Y0 642 aa26.69■■□□□ 1.86
SNX3-203ENST00000368979 PLXNA1Q9UIW2 1896 aa26.69■■□□□ 1.86
SNX3-203ENST00000368979 RHOBTB3O94955 611 aa26.68■■□□□ 1.86
SNX3-203ENST00000368979 TM4SF4P48230 202 aa26.68■■□□□ 1.86
SNX3-203ENST00000368979 SLC12A3P55017 1021 aa26.68■■□□□ 1.86
SNX3-203ENST00000368979 ASIC1P78348 528 aa26.68■■□□□ 1.86
SNX3-203ENST00000368979 RDM1Q8NG50 284 aa26.68■■□□□ 1.86
SNX3-203ENST00000368979 WRAP73Q9P2S5 460 aaPredicted RBP26.68■■□□□ 1.86
SNX3-203ENST00000368979 TCEAL9Q9UHQ7 104 aa26.68■■□□□ 1.86
SNX3-203ENST00000368979 WDR64B1ANS9 1081 aa26.67■■□□□ 1.86
SNX3-203ENST00000368979 COBLO75128 1261 aa26.67■■□□□ 1.86
SNX3-203ENST00000368979 EYA4O95677 639 aa26.67■■□□□ 1.86
SNX3-203ENST00000368979 P4HBP07237 508 aaKnown RBP26.67■■□□□ 1.86
SNX3-203ENST00000368979 GRB14Q14449 540 aa26.67■■□□□ 1.86
SNX3-203ENST00000368979 ZNF658Q5TYW1 1059 aaPredicted RBP26.67■■□□□ 1.86
SNX3-203ENST00000368979 SEPT14Q6ZU15 432 aa26.67■■□□□ 1.86
SNX3-203ENST00000368979 TPH2Q8IWU9 490 aa26.67■■□□□ 1.86
SNX3-203ENST00000368979 AOPEPQ8N6M6 819 aa26.67■■□□□ 1.86
SNX3-203ENST00000368979 SYT2Q8N9I0 419 aaPredicted RBP26.67■■□□□ 1.86
SNX3-203ENST00000368979 LXNQ9BS40 222 aa26.67■■□□□ 1.86
SNX3-203ENST00000368979 TLR2O60603 784 aa26.66■■□□□ 1.86
SNX3-203ENST00000368979 SP2Q02086 613 aa26.66■■□□□ 1.86
SNX3-203ENST00000368979 CT47A1Q5JQC4 288 aaPredicted RBP26.66■■□□□ 1.86
SNX3-203ENST00000368979 C17orf99Q6UX52 265 aa26.66■■□□□ 1.86
SNX3-203ENST00000368979 UNC13DQ70J99 1090 aa26.66■■□□□ 1.86
SNX3-203ENST00000368979 PLEKHH3Q7Z736 793 aa26.66■■□□□ 1.86
SNX3-203ENST00000368979 BANK1Q8NDB2 785 aa26.66■■□□□ 1.86
SNX3-203ENST00000368979 DDX12PQ92771 950 aa26.66■■□□□ 1.86
SNX3-203ENST00000368979 ZIC5Q96T25 663 aa26.66■■□□□ 1.86
SNX3-203ENST00000368979 PVALEFA0A1B0GWK0 134 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 ASB14A6NK59 587 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 CYP11B2P19099 503 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 CYP4F22Q6NT55 531 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 SMAP1Q8IYB5 467 aaPredicted RBP26.65■■□□□ 1.86
SNX3-203ENST00000368979 DNAJC19Q96DA6 116 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 JPH1Q9HDC5 661 aaPredicted RBP26.65■■□□□ 1.86
SNX3-203ENST00000368979 SAMM50Q9Y512 469 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 DOCK5Q9H7D0 1870 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 BECN2A8MW95 431 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 IKBKBO14920 756 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 SSBP05455 408 aaKnown RBP eCLIP26.65■■□□□ 1.86
SNX3-203ENST00000368979 DYMQ7RTS9 669 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 ZNF467Q7Z7K2 595 aaPredicted RBP26.65■■□□□ 1.86
SNX3-203ENST00000368979 GPBP1Q86WP2 473 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 CCDC47Q96A33 483 aaKnown RBP26.65■■□□□ 1.86
SNX3-203ENST00000368979 NACC1Q96RE7 527 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 BCAS3Q9H6U6 928 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 ZFYVE28Q9HCC9 887 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 SLC9A2Q9UBY0 812 aa26.65■■□□□ 1.86
SNX3-203ENST00000368979 LOXHD1Q8IVV2 1947 aa26.64■■□□□ 1.86
SNX3-203ENST00000368979 CEP350Q5VT06 3117 aa26.64■■□□□ 1.85
SNX3-203ENST00000368979 LYPLA2O95372 231 aa26.64■■□□□ 1.85
SNX3-203ENST00000368979 CD44P16070 742 aaKnown RBP26.64■■□□□ 1.85
SNX3-203ENST00000368979 NCAPHQ15003 741 aa26.64■■□□□ 1.85
SNX3-203ENST00000368979 SMYD4Q8IYR2 804 aaPredicted RBP26.64■■□□□ 1.85
SNX3-203ENST00000368979 BHMT2Q9H2M3 363 aa26.64■■□□□ 1.85
SNX3-203ENST00000368979 ZSWIM4Q9H7M6 989 aa26.64■■□□□ 1.85
SNX3-203ENST00000368979 EXOC1Q9NV70 894 aa26.64■■□□□ 1.85
SNX3-203ENST00000368979 SLC15A5A6NIM6 579 aa26.63■■□□□ 1.85
SNX3-203ENST00000368979 PPP1R3GB7ZBB8 358 aa26.63■■□□□ 1.85
SNX3-203ENST00000368979 GOLGA6L19H0YKK7 550 aa26.63■■□□□ 1.85
SNX3-203ENST00000368979 TGFB3P10600 412 aa26.63■■□□□ 1.85
SNX3-203ENST00000368979 UBA1P22314 1058 aaKnown RBP26.63■■□□□ 1.85
SNX3-203ENST00000368979 QARSP47897 775 aaKnown RBP26.63■■□□□ 1.85
SNX3-203ENST00000368979 ARSHQ5FYA8 562 aa26.63■■□□□ 1.85
SNX3-203ENST00000368979 PAXIP1Q6ZW49 1069 aaPredicted RBP26.63■■□□□ 1.85
SNX3-203ENST00000368979 GIMAP8Q8ND71 665 aaPredicted RBP26.63■■□□□ 1.85
SNX3-203ENST00000368979 PIGOQ8TEQ8 1089 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms