RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 SLC16A2P36021 539 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 FPGSQ05932 587 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 AP3B2Q13367 1082 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 GNL2Q13823 731 aaKnown RBP9.97□□□□□ -0.81
SNX27-201ENST00000368838 STK38Q15208 465 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 SF3A1Q15459 793 aaKnown RBP9.97□□□□□ -0.81
SNX27-201ENST00000368838 GNASQ5JWF2 1037 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 CCDC183Q5T5S1 534 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 C1orf53Q5VUE5 145 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 FAM109BQ6ICB4 259 aaPredicted RBP9.97□□□□□ -0.81
SNX27-201ENST00000368838 CCSAPQ6IQ19 270 aaPredicted RBP9.97□□□□□ -0.81
SNX27-201ENST00000368838 TTBK2Q6IQ55 1244 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 CHST13Q8NET6 341 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 TRERF1Q96PN7 1200 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 PYM1Q9BRP8 204 aaKnown RBP9.97□□□□□ -0.81
SNX27-201ENST00000368838 AMNQ9BXJ7 453 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 PPP1R12CQ9BZL4 782 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 KATNBL1Q9H079 304 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 RANBP17Q9H2T7 1088 aaKnown RBP9.97□□□□□ -0.81
SNX27-201ENST00000368838 SEMA6BQ9H3T3 888 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 ACAD9Q9H845 621 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 PDGFCQ9NRA1 345 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 TFIP11Q9UBB9 837 aaKnown RBP9.97□□□□□ -0.81
SNX27-201ENST00000368838 FBXO40Q9UH90 709 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 PRR12Q9ULL5 1215 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 PCDHA7Q9UN72 937 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 HPSEQ9Y251 543 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 SRPRBQ9Y5M8 271 aaKnown RBP9.97□□□□□ -0.81
SNX27-201ENST00000368838 DOCK5Q9H7D0 1870 aa9.97□□□□□ -0.81
SNX27-201ENST00000368838 TCF20Q9UGU0 1960 aaKnown RBP9.96□□□□□ -0.81
SNX27-201ENST00000368838 FRMPD2Q68DX3 1309 aaPredicted RBP9.96□□□□□ -0.81
SNX27-201ENST00000368838 PTPRSQ13332 1948 aa9.96□□□□□ -0.81
SNX27-201ENST00000368838 FOSP01100 380 aaPredicted RBP9.96□□□□□ -0.82
SNX27-201ENST00000368838 GOLGA8HP0CJ92 632 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 ACRP10323 421 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 GCFC2P16383 781 aaKnown RBP9.96□□□□□ -0.82
SNX27-201ENST00000368838 OAZ1P54368 228 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 ATP2C1P98194 919 aaPredicted RBP9.96□□□□□ -0.82
SNX27-201ENST00000368838 FAM160A1Q05DH4 1040 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 NR5A1Q13285 461 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 IER5LQ5T953 404 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 SYDE2Q5VT97 1194 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 PPP4R3AQ6IN85 833 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 CXCL17Q6UXB2 119 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 NSMFQ6X4W1 530 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.96□□□□□ -0.82
SNX27-201ENST00000368838 FBXO16Q8IX29 292 aaPredicted RBP9.96□□□□□ -0.82
SNX27-201ENST00000368838 REXO1Q8N1G1 1221 aaKnown RBP9.96□□□□□ -0.82
SNX27-201ENST00000368838 MSL3Q8N5Y2 521 aaKnown RBP9.96□□□□□ -0.82
SNX27-201ENST00000368838 FAM133AQ8N9E0 248 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 TET1Q8NFU7 2136 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 PPP1R13LQ8WUF5 828 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 CRYGNQ8WXF5 182 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 CHAMP1Q96JM3 812 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 GLT1D1Q96MS3 346 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 TSEN34Q9BSV6 310 aaKnown RBP9.96□□□□□ -0.82
SNX27-201ENST00000368838 ABHD16BQ9H3Z7 469 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 GDPD2Q9HCC8 539 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 GPCPD1Q9NPB8 672 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 TMEM63CQ9P1W3 806 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 PCDHA6Q9UN73 950 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 PCDHA8Q9Y5H6 950 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 CLIC4Q9Y696 253 aa9.96□□□□□ -0.82
SNX27-201ENST00000368838 SMCO2A6NFE2 343 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 MOXD2PA6NHM9 499 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 GRXCR1A8MXD5 290 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 SLC26A4O43511 780 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 DTNBO60941 627 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 USP11P51784 963 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 NAPAP54920 295 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 GJA9P57773 515 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 PSMC6P62333 389 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 TNFAIP2Q03169 654 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 SEMA3FQ13275 785 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 SNW1Q13573 536 aaKnown RBP9.95□□□□□ -0.82
SNX27-201ENST00000368838 ZSCAN23Q3MJ62 389 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 ANKRD33Q7Z3H0 272 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 NLRP7Q8WX94 980 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 MRPS27Q92552 414 aaKnown RBP9.95□□□□□ -0.82
SNX27-201ENST00000368838 POM121Q96HA1 1249 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 MBOAT7Q96N66 472 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.95□□□□□ -0.82
SNX27-201ENST00000368838 COL25A1Q9BXS0 654 aaPredicted RBP9.95□□□□□ -0.82
SNX27-201ENST00000368838 UBA5Q9GZZ9 404 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 UPF3AQ9H1J1 476 aaKnown RBP9.95□□□□□ -0.82
SNX27-201ENST00000368838 SPC25Q9HBM1 224 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 TBX21Q9UL17 535 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 CCPG1Q9ULG6 757 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 TANC1Q9C0D5 1861 aa9.95□□□□□ -0.82
SNX27-201ENST00000368838 CCDC194A0A1B0GVG4 234 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 RBAK-RBAKDNI3L0D1 243 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 DYNC1LI2O43237 492 aaPredicted RBP9.94□□□□□ -0.82
SNX27-201ENST00000368838 PPP1R11O60927 126 aaPredicted RBP9.94□□□□□ -0.82
SNX27-201ENST00000368838 PPFIA3O75145 1194 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 TIMP1P01033 207 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 FOSL2P15408 326 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 CSF2RAP15509 400 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 SMPD1P17405 629 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 CYP2C18P33260 490 aa9.94□□□□□ -0.82
SNX27-201ENST00000368838 PBX2P40425 430 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms