RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 MTMR10Q9NXD2 777 aa14.36□□□□□ -0.11
LMX1A-203ENST00000367893 PCDHA7Q9UN72 937 aa14.36□□□□□ -0.11
LMX1A-203ENST00000367893 DDX49Q9Y6V7 483 aaKnown RBP14.36□□□□□ -0.11
LMX1A-203ENST00000367893 SPATA31C2B4DYI2 1134 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 CTAGE5O15320 804 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 MARCKSP29966 332 aaPredicted RBP14.35□□□□□ -0.11
LMX1A-203ENST00000367893 ACLYP53396 1101 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 NKX3-2P78367 333 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 SEMA3FQ13275 785 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 MTMR1Q13613 665 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 CCDC144BQ3MJ40 725 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 GNPTABQ3T906 1256 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 ADALQ6DHV7 355 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 NLRX1Q86UT6 975 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 SLFN12Q8IYM2 578 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 KRI1Q8N9T8 703 aaKnown RBP14.35□□□□□ -0.11
LMX1A-203ENST00000367893 ZNF579Q8NAF0 562 aaKnown RBP14.35□□□□□ -0.11
LMX1A-203ENST00000367893 BADQ92934 168 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 ZFP91Q96JP5 570 aaPredicted RBP14.35□□□□□ -0.11
LMX1A-203ENST00000367893 CDHR1Q96JP9 859 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 AGO4Q9HCK5 861 aaKnown RBP14.35□□□□□ -0.11
LMX1A-203ENST00000367893 PRDM5Q9NQX1 630 aaPredicted RBP14.35□□□□□ -0.11
LMX1A-203ENST00000367893 PRKAG2Q9UGJ0 569 aa14.35□□□□□ -0.11
LMX1A-203ENST00000367893 RBM47A0AV96 593 aaKnown RBP14.34□□□□□ -0.11
LMX1A-203ENST00000367893 MOXD2PA6NHM9 499 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 IPO5O00410 1097 aaKnown RBP14.34□□□□□ -0.11
LMX1A-203ENST00000367893 KIAA0355O15063 1070 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 DHX15O43143 795 aaKnown RBP14.34□□□□□ -0.11
LMX1A-203ENST00000367893 CUTAO60888 179 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 PSMD10O75832 226 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 TGFB3P10600 412 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 MCM4P33991 863 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
LMX1A-203ENST00000367893 GJA9P57773 515 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 KCNA10Q16322 511 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 C9orf50Q5SZB4 431 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 B3GNT9Q6UX72 402 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 ANKRD33Q7Z3H0 272 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 IGSF22Q8N9C0 903 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 RIT2Q99578 217 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 SENP7Q9BQF6 1050 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 VTA1Q9NP79 307 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 LMBRD1Q9NUN5 540 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 CDH23Q9H251 3354 aa14.34□□□□□ -0.11
LMX1A-203ENST00000367893 LTBP2Q14767 1821 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 DOCK5Q9H7D0 1870 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.33□□□□□ -0.12
LMX1A-203ENST00000367893 A0A1W2PQ27 194 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 A0A1W2PQ64 194 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 A0A1W2PQD8 194 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 GOLGA6L22H0YM25 854 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 CLTBP09497 229 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 KCNA2P16389 499 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 ME1P48163 572 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 GRIN1Q05586 938 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 SPIRE1Q08AE8 756 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 FAAP100Q0VG06 881 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 PDIA5Q14554 519 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 SHHQ15465 462 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 FAM109BQ6ICB4 259 aaPredicted RBP14.33□□□□□ -0.12
LMX1A-203ENST00000367893 TAPT1Q6NXT6 567 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 CCDC62Q6P9F0 684 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 KCNV1Q6PIU1 500 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 DTHD1Q6ZMT9 781 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 TOX2Q96NM4 488 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 ZNF577Q9BSK1 485 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 VAV3Q9UKW4 847 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 PCDHA12Q9UN75 941 aa14.33□□□□□ -0.12
LMX1A-203ENST00000367893 NFASCO94856 1347 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 WDR81Q562E7 1941 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 PQBP1O60828 265 aaKnown RBP14.32□□□□□ -0.12
LMX1A-203ENST00000367893 ATP9AO75110 1047 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 PRPF40AO75400 957 aaKnown RBP14.32□□□□□ -0.12
LMX1A-203ENST00000367893 LONP1P36776 959 aaKnown RBP14.32□□□□□ -0.12
LMX1A-203ENST00000367893 TXKP42681 527 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 CDK7P50613 346 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 EPHB4P54760 987 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 ITGB3BPQ13352 177 aaPredicted RBP14.32□□□□□ -0.12
LMX1A-203ENST00000367893 PPP2R5CQ13362 524 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 SEPT14Q6ZU15 432 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 FBXO16Q8IX29 292 aaPredicted RBP14.32□□□□□ -0.12
LMX1A-203ENST00000367893 GJA10Q969M2 543 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 AK8Q96MA6 479 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 CLIC6Q96NY7 704 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 TTC12Q9H892 705 aaPredicted RBP14.32□□□□□ -0.12
LMX1A-203ENST00000367893 STARD7Q9NQZ5 370 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 TBC1D22BQ9NU19 505 aa14.32□□□□□ -0.12
LMX1A-203ENST00000367893 DDX41Q9UJV9 622 aaKnown RBP14.32□□□□□ -0.12
LMX1A-203ENST00000367893 GNEQ9Y223 722 aaKnown RBP14.32□□□□□ -0.12
LMX1A-203ENST00000367893 FAM237AA0A1B0GTK4 181 aa14.31□□□□□ -0.12
LMX1A-203ENST00000367893 VWA3AA6NCI4 1184 aa14.31□□□□□ -0.12
LMX1A-203ENST00000367893 DDX11L8A8MPP1 907 aa14.31□□□□□ -0.12
LMX1A-203ENST00000367893 GADD45BO75293 160 aaPredicted RBP14.31□□□□□ -0.12
LMX1A-203ENST00000367893 ASGR1P07306 291 aa14.31□□□□□ -0.12
LMX1A-203ENST00000367893 PTGS1P23219 599 aa14.31□□□□□ -0.12
LMX1A-203ENST00000367893 CMA1P23946 247 aa14.31□□□□□ -0.12
LMX1A-203ENST00000367893 TECP42680 631 aa14.31□□□□□ -0.12
LMX1A-203ENST00000367893 UBE2HP62256 183 aa14.31□□□□□ -0.12
LMX1A-203ENST00000367893 SP2Q02086 613 aa14.31□□□□□ -0.12
LMX1A-203ENST00000367893 SHC4Q6S5L8 630 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms