RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 PPFIA4O75335 1185 aa11.42□□□□□ -0.58
NUP43-203ENST00000367404 SDSP20132 328 aa11.42□□□□□ -0.58
NUP43-203ENST00000367404 RRP1P56182 461 aaKnown RBP11.42□□□□□ -0.58
NUP43-203ENST00000367404 ZNF200P98182 395 aaPredicted RBP11.42□□□□□ -0.58
NUP43-203ENST00000367404 HSDL1Q3SXM5 330 aa11.42□□□□□ -0.58
NUP43-203ENST00000367404 MYSM1Q5VVJ2 828 aa11.42□□□□□ -0.58
NUP43-203ENST00000367404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.42□□□□□ -0.583e-6■■■□□ 15.6
NUP43-203ENST00000367404 STOX1Q6ZVD7 989 aa11.42□□□□□ -0.58
NUP43-203ENST00000367404 FAM178BQ8IXR5 827 aa11.42□□□□□ -0.58
NUP43-203ENST00000367404 DHX37Q8IY37 1157 aaKnown RBP11.42□□□□□ -0.58
NUP43-203ENST00000367404 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.42□□□□□ -0.58
NUP43-203ENST00000367404 C17orf80Q9BSJ5 609 aa11.42□□□□□ -0.58
NUP43-203ENST00000367404 MAP3K20Q9NYL2 800 aaKnown RBP11.42□□□□□ -0.58
NUP43-203ENST00000367404 INSL6Q9Y581 213 aa11.42□□□□□ -0.58
NUP43-203ENST00000367404 LAMA4Q16363 1823 aa11.42□□□□□ -0.58
NUP43-203ENST00000367404 FAM86C2PA6NEL3 165 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 B4E1Z4 1266 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 RBAK-RBAKDNI3L0D1 243 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 PPP1R11O60927 126 aaPredicted RBP11.41□□□□□ -0.58
NUP43-203ENST00000367404 CFBP00751 764 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 OATP04181 439 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 PARP1P09874 1014 aaKnown RBP11.41□□□□□ -0.58
NUP43-203ENST00000367404 UBA1P22314 1058 aaKnown RBP11.41□□□□□ -0.58
NUP43-203ENST00000367404 COL19A1Q14993 1142 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 PLEKHG4Q58EX7 1191 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 CELF3Q5SZQ8 465 aaKnown RBP11.41□□□□□ -0.58
NUP43-203ENST00000367404 PPP1R18Q6NYC8 613 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 KCNV1Q6PIU1 500 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 VSIG10LQ86VR7 867 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 SAMD3Q8N6K7 520 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 DBF4BQ8NFT6 615 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 IL31RAQ8NI17 732 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 MRPL38Q96DV4 380 aaKnown RBP11.41□□□□□ -0.58
NUP43-203ENST00000367404 C16orf70Q9BSU1 422 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 AMNQ9BXJ7 453 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 OSBPL3Q9H4L5 887 aa11.41□□□□□ -0.58
NUP43-203ENST00000367404 RSPH10B2B2RC85 870 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 CAND2O75155 1236 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 GGPS1O95749 300 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 AMHP03971 560 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 RSPH10BP0C881 870 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 TGFB3P10600 412 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 KCNA5P22460 613 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 PGM5Q15124 567 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 FAM117BQ6P1L5 589 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 METTL3Q86U44 580 aaKnown RBP11.4□□□□□ -0.58
NUP43-203ENST00000367404 MYOCDQ8IZQ8 938 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 GJD3Q8N144 294 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 STAG2Q8N3U4 1231 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 NEK9Q8TD19 979 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 RILPL2Q969X0 211 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 SPATA33Q96N06 139 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 SAMD11Q96NU1 681 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 CRBNQ96SW2 442 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 DSCC1Q9BVC3 393 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 PRR14Q9BWN1 585 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 LNPKQ9C0E8 428 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 ZSWIM5Q9P217 1185 aa11.4□□□□□ -0.58
NUP43-203ENST00000367404 SIP14410 1827 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 FRMPD4Q14CM0 1322 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 PRR33A8MZF0 331 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 ZBTB5O15062 677 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 DHX16O60231 1041 aaKnown RBP11.39□□□□□ -0.59
NUP43-203ENST00000367404 IL9P15248 144 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 THPOP40225 353 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 SP2Q02086 613 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 SEC23AQ15436 765 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 SLC35G1Q2M3R5 365 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 PUS10Q3MIT2 529 aaKnown RBP11.39□□□□□ -0.59
NUP43-203ENST00000367404 EPC2Q52LR7 807 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 TIGD5Q53EQ6 642 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 SMC5Q8IY18 1101 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 GPKOWQ92917 476 aaPredicted RBP eCLIP11.39□□□□□ -0.59
NUP43-203ENST00000367404 TOP1MTQ969P6 601 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 VAT1LQ9HCJ6 419 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 CTNNA3Q9UI47 895 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 MAD2L2Q9UI95 211 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 PCDHB3Q9Y5E6 796 aa11.39□□□□□ -0.59
NUP43-203ENST00000367404 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.38□□□□□ -0.59
NUP43-203ENST00000367404 C17orf102A2RUQ5 167 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
NUP43-203ENST00000367404 KLRF2D3W0D1 207 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 H3BNC9 293 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 LGALS2P05162 132 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 SMIM10L2AP0DMW4 78 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 SMIM10L2BP0DMW5 78 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 MYCLP12524 364 aaPredicted RBP11.38□□□□□ -0.59
NUP43-203ENST00000367404 PTPROQ16827 1216 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 IMMTQ16891 758 aaKnown RBP11.38□□□□□ -0.59
NUP43-203ENST00000367404 PTCRAQ6ISU1 281 aaPredicted RBP11.38□□□□□ -0.59
NUP43-203ENST00000367404 CWC27Q6UX04 472 aaKnown RBP11.38□□□□□ -0.59
NUP43-203ENST00000367404 SEPT8Q92599 483 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 ATP6V0A1Q93050 837 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 UBAC1Q9BSL1 405 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 KRT23Q9C075 422 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 CNNM2Q9H8M5 875 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 PCDHA1Q9Y5I3 950 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 KIAA1217Q5T5P2 1943 aa11.38□□□□□ -0.59
NUP43-203ENST00000367404 PIEZO1Q92508 2521 aa11.37□□□□□ -0.59
NUP43-203ENST00000367404 H3BRB1 525 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms