RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZNF212Q9UDV6 495 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 FAF1Q9UNN5 650 aaPredicted RBP16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 MARK3P27448 753 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 COA7Q96BR5 231 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 FAM167AQ96KS9 214 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 NLRP4Q96MN2 994 aa16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 INTS9Q9NV88 658 aaKnown RBP16.94■□□□□ 0.3
NUCKS1-201ENST00000367142 MEIS1O00470 390 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 LDHAP00338 332 aaKnown RBP16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 PYGLP06737 847 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 TSPY1Q01534 308 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 PPP4R4Q6NUP7 873 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 TTLL6Q8N841 843 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 ZC3H15Q8WU90 426 aaKnown RBP16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 CCDC138Q96M89 665 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 TOM1L1O75674 476 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 APOEP02649 317 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 ADORA1P30542 326 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 NDUFA8P51970 172 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 JAK3P52333 1124 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 KIAA1755Q5JYT7 1200 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 TEKT2Q9UIF3 430 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 DENND3A2RUS2 1198 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 HSPA6P17066 643 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 DDIT3P35638 169 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 NNMTP40261 264 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 MXI1P50539 228 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 ARHGDIAP52565 204 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 LRRC41Q15345 812 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 ANGPTL8Q6UXH0 198 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 HACD3Q9P035 362 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 HPCAL4Q9UM19 191 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 ZBED1O96006 694 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 ATG16L1Q676U5 607 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 LMBRD1Q9NUN5 540 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 PAPOLAP51003 745 aaKnown RBP16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 RNF207Q6ZRF8 634 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 SNX19Q92543 992 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 TRIM15Q9C019 465 aa16.93■□□□□ 0.3
NUCKS1-201ENST00000367142 PSMD2Q13200 908 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 VPS39Q96JC1 886 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 USP44Q9H0E7 712 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 FBXO40Q9UH90 709 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 LRRD1A4D1F6 860 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 SLC8A1P32418 973 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 C10orf76Q5T2E6 689 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 ZNF658Q5TYW1 1059 aaPredicted RBP16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 RASGRP4Q8TDF6 673 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 ZMYM4Q5VZL5 1548 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 DTNBO60941 627 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 LUC7L3O95232 432 aaKnown RBP16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 NFX1Q12986 1120 aaKnown RBP16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 PTK2BQ14289 1009 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 TRIM45Q9H8W5 580 aaPredicted RBP16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.92■□□□□ 0.33e-8■■■■□ 22.2
NUCKS1-201ENST00000367142 NEMP1O14524 444 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 ZMYM1Q5SVZ6 1142 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 FOXP4Q8IVH2 680 aaPredicted RBP16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 TTC30BQ8N4P2 665 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 PIDD1Q9HB75 910 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 UBN2Q6ZU65 1347 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 PGRMC1O00264 195 aaKnown RBP16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 TAF11Q15544 211 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 TOPORSQ9NS56 1045 aaPredicted RBP16.92■□□□□ 0.3
NUCKS1-201ENST00000367142 GFPT2O94808 682 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 ZBBXA8MT70 800 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 ZNF341Q9BYN7 854 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 COPRSQ9NQ92 184 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 SCINQ9Y6U3 715 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 A0A1W2PQ27 194 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 A0A1W2PQ64 194 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 A0A1W2PQD8 194 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 TMCC1O94876 653 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 CASP14P31944 242 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 FKBP3Q00688 224 aaKnown RBP16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 IL17REQ8NFR9 667 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 MASTLQ96GX5 879 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 EIF2AQ9BY44 585 aaKnown RBP16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 MED4Q9NPJ6 270 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 ABCC4O15439 1325 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 EIF2AK2P19525 551 aaKnown RBP16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 SCRN1Q12765 414 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 ART3Q13508 389 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 PDCD7Q8N8D1 485 aaKnown RBP16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 COA1Q9GZY4 146 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 PIM2Q9P1W9 311 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 K7ERI5 159 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 GRAPQ13588 217 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 CYP4F22Q6NT55 531 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 SMAP1Q8IYB5 467 aaPredicted RBP16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 GRAPLQ8TC17 118 aaPredicted RBP16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 PUS3Q9BZE2 481 aaKnown RBP16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 ASAP1Q9ULH1 1129 aa16.91■□□□□ 0.3
NUCKS1-201ENST00000367142 TCP11X2Q5H9J9 407 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 ERICH1Q86X53 443 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 CCDC197Q8NCU1 140 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 IFT43Q96FT9 208 aa16.9■□□□□ 0.3
NUCKS1-201ENST00000367142 PBKQ96KB5 322 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms