RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 FGFBP2Q9BYJ0 223 aa8.97□□□□□ -0.97
CD46-208ENST00000367042 CELF4Q9BZC1 486 aaKnown RBP8.97□□□□□ -0.97
CD46-208ENST00000367042 LRRC27Q9C0I9 530 aa8.97□□□□□ -0.97
CD46-208ENST00000367042 ANKRD2Q9GZV1 360 aa8.97□□□□□ -0.97
CD46-208ENST00000367042 RIC8AQ9NPQ8 531 aa8.97□□□□□ -0.97
CD46-208ENST00000367042 FBXL5Q9UKA1 691 aa8.97□□□□□ -0.97
CD46-208ENST00000367042 PCDHB13Q9Y5F0 798 aa8.97□□□□□ -0.97
CD46-208ENST00000367042 DDX60Q8IY21 1712 aaKnown RBP8.96□□□□□ -0.97
CD46-208ENST00000367042 SSU72P8A0A1W2PR75 194 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 POTEB3A0JP26 581 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 HMGB1P1B2RPK0 211 aaPredicted RBP8.96□□□□□ -0.97
CD46-208ENST00000367042 POTECB2RU33 542 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 HGSO14964 777 aaPredicted RBP8.96□□□□□ -0.97
CD46-208ENST00000367042 SART1O43290 800 aaKnown RBP8.96□□□□□ -0.97
CD46-208ENST00000367042 TLR2O60603 784 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 KRT13P13646 458 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 SLC9A1P19634 815 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 HSD17B3P37058 310 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 MAGOHP61326 146 aaKnown RBP8.96□□□□□ -0.97
CD46-208ENST00000367042 KCNH2Q12809 1159 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 KCNV1Q6PIU1 500 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 POTEBQ6S5H4 581 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 KDM7AQ6ZMT4 941 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 USP38Q8NB14 1042 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 MAGOHBQ96A72 148 aaKnown RBP8.96□□□□□ -0.97
CD46-208ENST00000367042 NUCKS1Q9H1E3 243 aaKnown RBP8.96□□□□□ -0.97
CD46-208ENST00000367042 RNF14Q9UBS8 474 aa8.96□□□□□ -0.97
CD46-208ENST00000367042 FRMD3A2A2Y4 597 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 GRID2IPA4D2P6 1211 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 M0R2N6 131 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 LDHCP07864 332 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 COPB2P35606 906 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 ERVK-9P63128 1117 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 SKOR1P84550 965 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 PTK2Q05397 1052 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 DHX9Q08211 1270 aaKnown RBP8.96□□□□□ -0.98
CD46-208ENST00000367042 LLGL1Q15334 1064 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 NAB2Q15742 525 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 CDC37Q16543 378 aaPredicted RBP8.96□□□□□ -0.98
CD46-208ENST00000367042 HGSNATQ68CP4 663 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 ALKBH5Q6P6C2 394 aaKnown RBP8.96□□□□□ -0.98
CD46-208ENST00000367042 LRRC55Q6ZSA7 311 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 IQCKQ8N0W5 287 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 EMILIN3Q9NT22 766 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 DOT1LQ8TEK3 1739 aa8.96□□□□□ -0.98
CD46-208ENST00000367042 TMEM110-MUSTN1A8MSY1 372 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 PGRMC1O00264 195 aaKnown RBP8.95□□□□□ -0.98
CD46-208ENST00000367042 CLIC2O15247 247 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 CPP00450 1065 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 EPB41P11171 864 aaKnown RBP8.95□□□□□ -0.98
CD46-208ENST00000367042 HNRNPH3P31942 346 aaKnown RBP8.95□□□□□ -0.98
CD46-208ENST00000367042 NF2P35240 595 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 STAT3P40763 770 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 GSTO1P78417 241 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 ITIH3Q06033 890 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 PABPC4Q13310 644 aaKnown RBP eCLIP8.95□□□□□ -0.98
CD46-208ENST00000367042 IFI16Q16666 785 aaKnown RBP8.95□□□□□ -0.98
CD46-208ENST00000367042 RUFY4Q6ZNE9 571 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 CCDC13Q8IYE1 715 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 DAGLBQ8NCG7 672 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 WDR66Q8TBY9 1149 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 ANKS1AQ92625 1134 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 CYFIP2Q96F07 1278 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.95□□□□□ -0.981e-8■■■■■ 43.5
CD46-208ENST00000367042 GDF3Q9NR23 364 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 NOC2LQ9Y3T9 749 aaKnown RBP8.95□□□□□ -0.98
CD46-208ENST00000367042 TIAM2Q8IVF5 1701 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 BCL9LQ86UU0 1499 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 PHF20L1A8MW92 1017 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 TTI1O43156 1089 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 ITGA4P13612 1032 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 CYP4A11Q02928 519 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 EXOC3L4Q17RC7 722 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 KCTD1Q719H9 257 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 TRMT1LQ7Z2T5 733 aaKnown RBP8.95□□□□□ -0.98
CD46-208ENST00000367042 SUGP1Q8IWZ8 645 aaKnown RBP8.95□□□□□ -0.98
CD46-208ENST00000367042 CACNA2D3Q8IZS8 1091 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 ARMCX3Q9UH62 379 aaPredicted RBP8.95□□□□□ -0.98
CD46-208ENST00000367042 HDAC9Q9UKV0 1011 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 UTP11Q9Y3A2 253 aaKnown RBP8.95□□□□□ -0.98
CD46-208ENST00000367042 GMNCA6NCL1 334 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 FLOT1O75955 427 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 KIF4AO95239 1232 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 PLA2G4BP0C869 781 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 XRCC5P13010 732 aaKnown RBP8.95□□□□□ -0.98
CD46-208ENST00000367042 ECM1Q16610 540 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 MEI1Q5TIA1 1274 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 TPTE2Q6XPS3 522 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 CCDC26Q8TAB7 109 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 MDM1Q8TC05 714 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 TBC1D31Q96DN5 1066 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 CEP89Q96ST8 783 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 SPZ1Q9BXG8 430 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 KLC4Q9NSK0 619 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 NUP98P52948 1817 aa8.95□□□□□ -0.98
CD46-208ENST00000367042 POTEFA5A3E0 1075 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 USP17L15C9J2P7 530 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 USP17L13C9JLJ4 530 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 USP17L11C9JVI0 530 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 USP17L18D6R9N7 530 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms