RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 TRIM50Q86XT4 487 aa19.3■□□□□ 0.68
PRKN-202ENST00000366892 ZMYND12Q9H0C1 365 aa19.3■□□□□ 0.68
PRKN-202ENST00000366892 ZNF576Q9H609 170 aa19.3■□□□□ 0.68
PRKN-202ENST00000366892 NCOA5Q9HCD5 579 aaKnown RBP19.3■□□□□ 0.68
PRKN-202ENST00000366892 PRUNE2Q8WUY3 3088 aa19.3■□□□□ 0.68
PRKN-202ENST00000366892 GSTTP1A0A1W2PQM5 241 aa19.29■□□□□ 0.68
PRKN-202ENST00000366892 ACTN1P12814 892 aa19.29■□□□□ 0.68
PRKN-202ENST00000366892 IFNAR1P17181 557 aa19.29■□□□□ 0.68
PRKN-202ENST00000366892 TCF7P36402 384 aaPredicted RBP19.29■□□□□ 0.68
PRKN-202ENST00000366892 SREBF1P36956 1147 aa19.29■□□□□ 0.68
PRKN-202ENST00000366892 AKAP17AQ02040 695 aaKnown RBP19.29■□□□□ 0.68
PRKN-202ENST00000366892 CEP55Q53EZ4 464 aa19.29■□□□□ 0.68
PRKN-202ENST00000366892 JAKMIP3Q5VZ66 844 aa19.29■□□□□ 0.68
PRKN-202ENST00000366892 SERINC5Q86VE9 423 aa19.29■□□□□ 0.68
PRKN-202ENST00000366892 SEPT1Q8WYJ6 367 aa19.29■□□□□ 0.68
PRKN-202ENST00000366892 ATP6V0A1Q93050 837 aa19.29■□□□□ 0.68
PRKN-202ENST00000366892 IL17RAQ96F46 866 aa19.29■□□□□ 0.68
PRKN-202ENST00000366892 RNF26Q9BY78 433 aaPredicted RBP19.29■□□□□ 0.68
PRKN-202ENST00000366892 TRIP12Q14669 1992 aaPredicted RBP19.28■□□□□ 0.68
PRKN-202ENST00000366892 SCN5AQ14524 2016 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 ESYT2A0FGR8 921 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 ADAMTS3O15072 1205 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 ARP10275 920 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 GRIN2CQ14957 1233 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 ZNF618Q5T7W0 954 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 TRAF7Q6Q0C0 670 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 CCDC12Q8WUD4 166 aaPredicted RBP19.28■□□□□ 0.68
PRKN-202ENST00000366892 LARP6Q9BRS8 491 aaKnown RBP19.28■□□□□ 0.68
PRKN-202ENST00000366892 SLC26A6Q9BXS9 759 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 SLKQ9H2G2 1235 aaPredicted RBP19.28■□□□□ 0.68
PRKN-202ENST00000366892 C6orf50Q9HD87 102 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 SETD4Q9NVD3 440 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 MSRAQ9UJ68 235 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 ZNF215Q9UL58 517 aaPredicted RBP19.28■□□□□ 0.68
PRKN-202ENST00000366892 CHD7Q9P2D1 2997 aa19.28■□□□□ 0.68
PRKN-202ENST00000366892 MEIS1O00470 390 aa19.27■□□□□ 0.68
PRKN-202ENST00000366892 TREHO43280 583 aa19.27■□□□□ 0.68
PRKN-202ENST00000366892 ST18O60284 1047 aa19.27■□□□□ 0.68
PRKN-202ENST00000366892 NBNO60934 754 aa19.27■□□□□ 0.68
PRKN-202ENST00000366892 PARNO95453 639 aaKnown RBP19.27■□□□□ 0.68
PRKN-202ENST00000366892 ATP2A2P16615 1042 aaKnown RBP19.27■□□□□ 0.68
PRKN-202ENST00000366892 RAB30Q15771 203 aa19.27■□□□□ 0.68
PRKN-202ENST00000366892 MYLIPQ8WY64 445 aa19.27■□□□□ 0.68
PRKN-202ENST00000366892 ZNF274Q96GC6 653 aaPredicted RBP19.27■□□□□ 0.68
PRKN-202ENST00000366892 DOCK5Q9H7D0 1870 aa19.27■□□□□ 0.67
PRKN-202ENST00000366892 CXCL10P02778 98 aa19.26■□□□□ 0.67
PRKN-202ENST00000366892 PTMSP20962 102 aa19.26■□□□□ 0.67
PRKN-202ENST00000366892 MCM2P49736 904 aa19.26■□□□□ 0.67
PRKN-202ENST00000366892 RABGGTBP53611 331 aa19.26■□□□□ 0.67
PRKN-202ENST00000366892 ARHGAP4P98171 946 aa19.26■□□□□ 0.67
PRKN-202ENST00000366892 TET1Q8NFU7 2136 aa19.26■□□□□ 0.67
PRKN-202ENST00000366892 CRYGNQ8WXF5 182 aa19.26■□□□□ 0.67
PRKN-202ENST00000366892 JPH1Q9HDC5 661 aaPredicted RBP19.26■□□□□ 0.67
PRKN-202ENST00000366892 PDRG1Q9NUG6 133 aa19.26■□□□□ 0.67
PRKN-202ENST00000366892 YBX2Q9Y2T7 364 aaKnown RBP19.26■□□□□ 0.67
PRKN-202ENST00000366892 GNAT1P11488 350 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 GNA11P29992 359 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 ZNF76P36508 570 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 THPOP40225 353 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 MBTPS1Q14703 1052 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 REXO1Q8N1G1 1221 aaKnown RBP19.25■□□□□ 0.67
PRKN-202ENST00000366892 SLC17A8Q8NDX2 589 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 AGO4Q9HCK5 861 aaKnown RBP19.25■□□□□ 0.67
PRKN-202ENST00000366892 SLC9A2Q9UBY0 812 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 FAM86B1E9PN63 330 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 RBAK-RBAKDNI3L0D1 243 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 BAIAP3O94812 1187 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 CYP3A4P08684 503 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 FAM86B2P0C5J1 330 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 DDIT3P35638 169 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 ADAM17P78536 824 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 ITGB3BPQ13352 177 aaPredicted RBP19.25■□□□□ 0.67
PRKN-202ENST00000366892 MCTP2Q6DN12 878 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 PHOSPHO2Q8TCD6 241 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 GLG1Q92896 1179 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 NKX2-4Q9H2Z4 354 aa19.25■□□□□ 0.67
PRKN-202ENST00000366892 NFASCO94856 1347 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 NRCAMQ92823 1304 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 RSPH10B2B2RC85 870 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 RSPH10BP0C881 870 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 MYOGP15173 224 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 DEKP35659 375 aaKnown RBP19.24■□□□□ 0.67
PRKN-202ENST00000366892 NIPA1Q7RTP0 329 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 LMBR1Q8WVP7 490 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 SDF4Q9BRK5 362 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 SMARCAD1Q9H4L7 1026 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 SLC28A3Q9HAS3 691 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 ERAP1Q9NZ08 941 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 VPS54Q9P1Q0 977 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 PCDHA11Q9Y5I1 949 aa19.24■□□□□ 0.67
PRKN-202ENST00000366892 TANC1Q9C0D5 1861 aa19.23■□□□□ 0.67
PRKN-202ENST00000366892 MARK3P27448 753 aa19.23■□□□□ 0.67
PRKN-202ENST00000366892 SSRP1Q08945 709 aaKnown RBP19.23■□□□□ 0.67
PRKN-202ENST00000366892 STK3Q13188 491 aa19.23■□□□□ 0.67
PRKN-202ENST00000366892 TCTN1Q2MV58 587 aa19.23■□□□□ 0.67
PRKN-202ENST00000366892 CNKSR3Q6P9H4 555 aa19.23■□□□□ 0.67
PRKN-202ENST00000366892 CCDC148Q8NFR7 591 aa19.23■□□□□ 0.67
PRKN-202ENST00000366892 BICD2Q8TD16 824 aa19.23■□□□□ 0.67
PRKN-202ENST00000366892 RASGRP4Q8TDF6 673 aa19.23■□□□□ 0.67
PRKN-202ENST00000366892 SLC9A7Q96T83 725 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms