RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 MYO9BQ13459 2157 aa10.59□□□□□ -0.71
MRPL55-216ENST00000366744 TET1Q8NFU7 2136 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 SZT2Q5T011 3432 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 DDX39AO00148 427 aaKnown RBP10.58□□□□□ -0.72
MRPL55-216ENST00000366744 HAS3O00219 553 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 IPO5O00410 1097 aaKnown RBP10.58□□□□□ -0.72
MRPL55-216ENST00000366744 ST18O60284 1047 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 FGBP02675 491 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 CYP3A4P08684 503 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 SELPP16109 830 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 PPFIA1Q13136 1202 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 NONOQ15233 471 aaKnown RBP eCLIP10.58□□□□□ -0.72
MRPL55-216ENST00000366744 PRR16Q569H4 304 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 ZNF697Q5TEC3 545 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 LRRC8DQ7L1W4 858 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 KRT25Q7Z3Z0 450 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 DEFB128Q7Z7B8 93 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 BLIDQ8IZY5 108 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 DAGLBQ8NCG7 672 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 RASGRP4Q8TDF6 673 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 ATP6V0A1Q93050 837 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 SCLYQ96I15 445 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 LRCH3Q96II8 777 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 NAP1L4Q99733 375 aaKnown RBP10.58□□□□□ -0.72
MRPL55-216ENST00000366744 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.58□□□□□ -0.721e-7■■■■□ 24.9
MRPL55-216ENST00000366744 C16orf70Q9BSU1 422 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 AGO4Q9HCK5 861 aaKnown RBP10.58□□□□□ -0.72
MRPL55-216ENST00000366744 TBC1D22BQ9NU19 505 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 ORC3Q9UBD5 711 aaPredicted RBP10.58□□□□□ -0.72
MRPL55-216ENST00000366744 UMODL1Q5DID0 1318 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 NRCAMQ92823 1304 aa10.58□□□□□ -0.72
MRPL55-216ENST00000366744 PTPRSQ13332 1948 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 MEIS1O00470 390 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 SOX1O00570 391 aaPredicted RBP10.57□□□□□ -0.72
MRPL55-216ENST00000366744 ATP9AO75110 1047 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 CAND2O75155 1236 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 SEC24BO95487 1268 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 RPLP2P05387 115 aaKnown RBP10.57□□□□□ -0.72
MRPL55-216ENST00000366744 ACRP10323 421 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 MARK3P27448 753 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 KCNJ6P48051 423 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 SLC26A2P50443 739 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 ACTR2P61160 394 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 SMAD3P84022 425 aaKnown RBP10.57□□□□□ -0.72
MRPL55-216ENST00000366744 KRT76Q01546 638 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 MIS18BP1Q6P0N0 1132 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 ZNF365Q70YC5 407 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 RSPH3Q86UC2 560 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 SMAP1Q8IYB5 467 aaPredicted RBP10.57□□□□□ -0.72
MRPL55-216ENST00000366744 SH2B1Q9NRF2 756 aaPredicted RBP10.57□□□□□ -0.72
MRPL55-216ENST00000366744 LIMCH1Q9UPQ0 1083 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 SAMM50Q9Y512 469 aa10.57□□□□□ -0.72
MRPL55-216ENST00000366744 ARID2Q68CP9 1835 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.56□□□□□ -0.72
MRPL55-216ENST00000366744 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.56□□□□□ -0.72
MRPL55-216ENST00000366744 FAM86B1E9PN63 330 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 M0QZ92 97 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 MARCH6O60337 910 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 GAS7O60861 476 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 FAM86B2P0C5J1 330 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 ARP10275 920 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 KRT2P35908 639 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 THPOP40225 353 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 USP11P51784 963 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 EPHB4P54760 987 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 RABEP1Q15276 862 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 SAFBQ15424 915 aaKnown RBP eCLIP10.56□□□□□ -0.72
MRPL55-216ENST00000366744 RAB30Q15771 203 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 ME3Q16798 604 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 TMEM240Q5SV17 173 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 TAF2Q6P1X5 1199 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 OTOP2Q7RTS6 562 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 SERINC5Q86VE9 423 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 CKAP2LQ8IYA6 745 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 DEFB123Q8N688 67 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 NECAB1Q8N987 351 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 IL27Q8NEV9 243 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 CYP2W1Q8TAV3 490 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 TBCKQ8TEA7 893 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 LMBR1Q8WVP7 490 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 ZSCAN31Q96LW9 406 aaPredicted RBP10.56□□□□□ -0.72
MRPL55-216ENST00000366744 AIFM3Q96NN9 605 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 TEKT3Q9BXF9 490 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 TUBE1Q9UJT0 475 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 KIF3AQ9Y496 699 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 SLC4A7Q9Y6M7 1214 aa10.56□□□□□ -0.72
MRPL55-216ENST00000366744 IGLV3-22A0A075B6J6 115 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 TMEM265A0A087WTH1 108 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 RRN3P2A6NIE6 340 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 WDR64B1ANS9 1081 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 EFCAB14O75071 495 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 BAIAP3O94812 1187 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 LARGE1O95461 756 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 PSAPP07602 524 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 IQCF3P0C7M6 154 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 CKBP12277 381 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 GCFC2P16383 781 aaKnown RBP10.55□□□□□ -0.72
MRPL55-216ENST00000366744 RBM25P49756 843 aaKnown RBP10.55□□□□□ -0.72
MRPL55-216ENST00000366744 STAT5BP51692 787 aa10.55□□□□□ -0.72
MRPL55-216ENST00000366744 RBL2Q08999 1139 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms