RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ADAM9Q13443 819 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 TCEA2Q15560 299 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 PAN2Q504Q3 1202 aaKnown RBP4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 FSTL4Q6MZW2 842 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 TMC5Q6UXY8 1006 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 LIPIQ6XZB0 460 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 SPOCD1Q6ZMY3 1216 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 OVCH1Q7RTY7 1134 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 KRTAP1-3Q8IUG1 177 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 SIAH1Q8IUQ4 282 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 LINC01356Q8N9X3 169 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 NGRNQ9NPE2 291 aaKnown RBP4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 HSPBP1Q9NZL4 362 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 NUB1Q9Y5A7 615 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 ADAMTS20P59510 1910 aa4.75□□□□□ -1.65
RNU4-48P-201ENST00000365559 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 OPA1O60313 960 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 TRIM13O60858 407 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 ASLP04424 464 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 PTPN1P18031 435 aaKnown RBP4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 THBS2P35442 1172 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 IGFALSP35858 605 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 CAP1Q01518 475 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 RTP5Q14D33 572 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 SEC23AQ15436 765 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 TM4SF20Q53R12 229 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 TMEM177Q53S58 311 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 FIGNQ5HY92 759 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 BTBD8Q5XKL5 378 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 ZCCHC8Q6NZY4 707 aaKnown RBP4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 NLGN4XQ8N0W4 816 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 SYNPOQ8N3V7 929 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 KYQ8NBH2 561 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 ZSWIM3Q96MP5 696 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 PCDH18Q9HCL0 1135 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 ATP23Q9Y6H3 246 aa4.74□□□□□ -1.65
RNU4-48P-201ENST00000365559 TLDC2A0PJX2 215 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 SH3D21A4FU49 640 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 M0R2C6 588 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 ENPP3O14638 875 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 GLRX3O76003 335 aaKnown RBP4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 APPP05067 770 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 BMP7P18075 431 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 PHF19Q5T6S3 580 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 CD276Q5ZPR3 534 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 CPZQ66K79 652 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 HHIPL2Q6UWX4 724 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 EP400NLQ6ZTU2 488 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 NOSTRINQ8IVI9 506 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 TTLL6Q8N841 843 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 RIC8BQ9NVN3 520 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 SAMD15Q9P1V8 674 aa4.73□□□□□ -1.65
RNU4-48P-201ENST00000365559 FAM83GA6ND36 823 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 SCDO00767 359 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 SMARCA5O60264 1052 aaPredicted RBP4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 CLASP2O75122 1294 aaKnown RBP4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 NPTXRO95502 500 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 JMJD7P0C870 316 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 MECP2P51608 486 aaKnown RBP4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 SLURP1P55000 103 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 DALRD3Q5D0E6 543 aaKnown RBP4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 PRR31Q5SQ13 230 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 PIK3R6Q5UE93 754 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 VASNQ6EMK4 673 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 KIAA0907Q7Z7F0 614 aaPredicted RBP4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 DDX53Q86TM3 631 aaKnown RBP4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 DHX37Q8IY37 1157 aaKnown RBP4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 CARFQ8N187 725 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 DTX3Q8N9I9 347 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 MARCH10Q8NA82 808 aaPredicted RBP4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 SYT8Q8NBV8 401 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 NINJ1Q92982 152 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 TMEM209Q96SK2 561 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 FEZ1Q99689 392 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 SPATA25Q9BR10 227 aa4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 MAGEC2Q9UBF1 373 aaPredicted RBP4.72□□□□□ -1.65
RNU4-48P-201ENST00000365559 B4E1Z4 1266 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 TRAF5O00463 557 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 C4BPAP04003 597 aaKnown RBP4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 RPL13P26373 211 aaKnown RBP4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 GJA4P35212 333 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 SARSP49591 514 aaKnown RBP4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 MLLT6P55198 1093 aaPredicted RBP4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 PFKPQ01813 784 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 DBPQ10586 325 aaPredicted RBP4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 SKIDA1Q1XH10 827 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 CDCA2Q69YH5 1023 aaPredicted RBP4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 TTLL7Q6ZT98 887 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 NIM1KQ8IY84 436 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 C2orf69Q8N8R5 385 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 CLIC6Q96NY7 704 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 KCNC2Q96PR1 638 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 SLC39A2Q9NP94 309 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 INTS7Q9NVH2 962 aaKnown RBP4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 NTMQ9P121 344 aa4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 TMA7Q9Y2S6 64 aaKnown RBP4.71□□□□□ -1.66
RNU4-48P-201ENST00000365559 SLC12A8A0AV02 714 aa4.7□□□□□ -1.66
RNU4-48P-201ENST00000365559 PRAMEF25A6NGN4 478 aa4.7□□□□□ -1.66
RNU4-48P-201ENST00000365559 ZNF839A8K0R7 811 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms