RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 RAD54LQ92698 747 aa20.2■□□□□ 0.82
CCDC7-203ENST00000362006 USP6NLQ92738 828 aa20.2■□□□□ 0.82
CCDC7-203ENST00000362006 JPH1Q9HDC5 661 aaPredicted RBP20.2■□□□□ 0.82
CCDC7-203ENST00000362006 SLC9A2Q9UBY0 812 aa20.2■□□□□ 0.82
CCDC7-203ENST00000362006 P4HBP07237 508 aaKnown RBP20.19■□□□□ 0.82
CCDC7-203ENST00000362006 AFMP43652 599 aa20.19■□□□□ 0.82
CCDC7-203ENST00000362006 IRF5Q13568 498 aa20.19■□□□□ 0.82
CCDC7-203ENST00000362006 SMARCE1Q969G3 411 aa20.19■□□□□ 0.82
CCDC7-203ENST00000362006 TSPY26PQ9H489 355 aa20.19■□□□□ 0.82
CCDC7-203ENST00000362006 DNM3Q9UQ16 869 aa20.19■□□□□ 0.82
CCDC7-203ENST00000362006 MCM3APO60318 1980 aa20.19■□□□□ 0.82
CCDC7-203ENST00000362006 POTEB3A0JP26 581 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 SLITRK3O94933 977 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 KIF22Q14807 665 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 NT5DC1Q5TFE4 455 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 POTEBQ6S5H4 581 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 SCFD2Q8WU76 684 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 TINF2Q9BSI4 451 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 FUCA2Q9BTY2 467 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 BLOC1S4Q9NUP1 217 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.18■□□□□ 0.82
CCDC7-203ENST00000362006 SAMM50Q9Y512 469 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 PCDHA10Q9Y5I2 948 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 DOCK3Q8IZD9 2030 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 LACTBP83111 547 aaPredicted RBP20.18■□□□□ 0.82
CCDC7-203ENST00000362006 TTLL4Q14679 1199 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 ECM1Q16610 540 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 EEPD1Q7L9B9 569 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 SPATA20Q8TB22 786 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 DYDC2Q96IM9 177 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 RNF186Q9NXI6 227 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 GJD2Q9UKL4 321 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 PCDHA5Q9Y5H7 936 aa20.18■□□□□ 0.82
CCDC7-203ENST00000362006 THSD7BQ9C0I4 1608 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 FOXN1O15353 648 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 DKC1O60832 514 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCDC7-203ENST00000362006 TYRO3Q06418 890 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 DPYDQ12882 1025 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 TPH2Q8IWU9 490 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 NPLOC4Q8TAT6 608 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 GSDMAQ96QA5 445 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 NACC1Q96RE7 527 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 ABHD16BQ9H3Z7 469 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 DDX41Q9UJV9 622 aaKnown RBP20.17■□□□□ 0.82
CCDC7-203ENST00000362006 RBM47A0AV96 593 aaKnown RBP20.17■□□□□ 0.82
CCDC7-203ENST00000362006 CAVIN2O95810 425 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 UBA1P22314 1058 aaKnown RBP20.17■□□□□ 0.82
CCDC7-203ENST00000362006 SARSP49591 514 aaKnown RBP20.17■□□□□ 0.82
CCDC7-203ENST00000362006 SP2Q02086 613 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 SP3Q02447 781 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 OLFML2BQ68BL8 750 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 GRAMD1CQ8IYS0 662 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 TRIML1Q8N9V2 468 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 APBA2Q99767 749 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 ZSWIM4Q9H7M6 989 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 ANO10Q9NW15 660 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 RGL1Q9NZL6 768 aa20.17■□□□□ 0.82
CCDC7-203ENST00000362006 LOXHD1Q8IVV2 1947 aa20.16■□□□□ 0.82
CCDC7-203ENST00000362006 TBC1D8O95759 1140 aa20.16■□□□□ 0.82
CCDC7-203ENST00000362006 CCNE2O96020 404 aa20.16■□□□□ 0.82
CCDC7-203ENST00000362006 PSAPP07602 524 aa20.16■□□□□ 0.82
CCDC7-203ENST00000362006 PSMC4P43686 418 aa20.16■□□□□ 0.82
CCDC7-203ENST00000362006 QARSP47897 775 aaKnown RBP20.16■□□□□ 0.82
CCDC7-203ENST00000362006 CYP4A11Q02928 519 aa20.16■□□□□ 0.82
CCDC7-203ENST00000362006 STX1AQ16623 288 aa20.16■□□□□ 0.82
CCDC7-203ENST00000362006 FBXO16Q8IX29 292 aaPredicted RBP20.16■□□□□ 0.82
CCDC7-203ENST00000362006 LRRC15Q8TF66 581 aa20.16■□□□□ 0.82
CCDC7-203ENST00000362006 MTRQ99707 1265 aa20.16■□□□□ 0.82
CCDC7-203ENST00000362006 C7orf25Q9BPX7 421 aa20.16■□□□□ 0.82
CCDC7-203ENST00000362006 POTEFA5A3E0 1075 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 TRPA1O75762 1119 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 LYPLA2O95372 231 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 SNAI1O95863 264 aaPredicted RBP20.15■□□□□ 0.82
CCDC7-203ENST00000362006 PRR29P0C7W0 189 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 CTTNQ14247 550 aaKnown RBP20.15■□□□□ 0.82
CCDC7-203ENST00000362006 MIS18BP1Q6P0N0 1132 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 CCDC62Q6P9F0 684 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 POTEGQ6S5H5 508 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 METTL7BQ6UX53 244 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 CYFIP1Q7L576 1253 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 BMP2KQ9NSY1 1161 aaPredicted RBP20.15■□□□□ 0.82
CCDC7-203ENST00000362006 RMND1Q9NWS8 449 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.15■□□□□ 0.82
CCDC7-203ENST00000362006 EYA4O95677 639 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 XRCC6P12956 609 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCDC7-203ENST00000362006 XRCC5P13010 732 aaKnown RBP20.15■□□□□ 0.82
CCDC7-203ENST00000362006 ACTR2P61160 394 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 PSMC5P62195 406 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 MCM6Q14566 821 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 CNNM4Q6P4Q7 775 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 KCNK18Q7Z418 384 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 ERCC4Q92889 916 aaPredicted RBP20.15■□□□□ 0.82
CCDC7-203ENST00000362006 CCDC47Q96A33 483 aaKnown RBP20.15■□□□□ 0.82
CCDC7-203ENST00000362006 LXNQ9BS40 222 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 MLXIPQ9HAP2 919 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 SAGE1Q9NXZ1 904 aa20.15■□□□□ 0.82
CCDC7-203ENST00000362006 E9PMD0 336 aa20.14■□□□□ 0.81
CCDC7-203ENST00000362006 FARP2O94887 1054 aaPredicted RBP20.14■□□□□ 0.81
CCDC7-203ENST00000362006 ATG7O95352 703 aa20.14■□□□□ 0.81
CCDC7-203ENST00000362006 PLA2G4BP0C869 781 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms