RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 TEDDM1Q5T9Z0 273 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 ARL6IP4Q66PJ3 421 aaKnown RBP11.43□□□□□ -0.58
HIPK1-202ENST00000361587 PDIK1LQ8N165 341 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 FAM133AQ8N9E0 248 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 NBPF3Q9H094 633 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 CEP19Q96LK0 163 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 PARD6BQ9BYG5 372 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 KRT82Q9NSB4 513 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 RPSAP08865 295 aaKnown RBP11.43□□□□□ -0.58
HIPK1-202ENST00000361587 RWDD2BP57060 319 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 CAV1Q03135 178 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 PRPF38AQ8NAV1 312 aaKnown RBP11.43□□□□□ -0.58
HIPK1-202ENST00000361587 PAMP19021 973 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 EIF4A3P38919 411 aaKnown RBP11.43□□□□□ -0.58
HIPK1-202ENST00000361587 MXI1P50539 228 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 ARL13BQ3SXY8 428 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 FAM133BQ5BKY9 247 aaKnown RBP11.43□□□□□ -0.58
HIPK1-202ENST00000361587 C11orf57Q6ZUT1 292 aaPredicted RBP11.43□□□□□ -0.58
HIPK1-202ENST00000361587 ARMCX2Q7L311 632 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 FAM149B1Q96BN6 582 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 KANSL2Q9H9L4 492 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 PARVGQ9HBI0 331 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 NOP53Q9NZM5 478 aaKnown RBP11.43□□□□□ -0.58
HIPK1-202ENST00000361587 NOVA2Q9UNW9 492 aaKnown RBP11.43□□□□□ -0.58
HIPK1-202ENST00000361587 TCP10L2B9ZVM9 353 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 TAF1BQ53T94 588 aaPredicted RBP11.43□□□□□ -0.58
HIPK1-202ENST00000361587 FSCBQ5H9T9 825 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 CRLF3Q8IUI8 442 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 PGBD1Q96JS3 809 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 ZBTB18Q99592 522 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 TMEM60Q9H2L4 133 aa11.43□□□□□ -0.58
HIPK1-202ENST00000361587 SPAG7O75391 227 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 GFPT2O94808 682 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 PLS3P13797 630 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 ABI1Q8IZP0 508 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 UBE2TQ9NPD8 197 aaPredicted RBP11.42□□□□□ -0.58
HIPK1-202ENST00000361587 SH3GLB2Q9NR46 395 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 EMILIN3Q9NT22 766 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 MIF4GDA9UHW6 222 aaKnown RBP11.42□□□□□ -0.58
HIPK1-202ENST00000361587 KRT37O76014 449 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 IFNAR1P17181 557 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 OSBPP22059 807 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 SPARCL1Q14515 664 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 CASP8Q14790 479 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 NBPF9Q3BBW0 867 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 SLFN12LQ6IEE8 588 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 MYLK4Q86YV6 388 aaPredicted RBP11.42□□□□□ -0.58
HIPK1-202ENST00000361587 LRRC4Q9HBW1 653 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.58
HIPK1-202ENST00000361587 SUCLA2Q9P2R7 463 aaPredicted RBP11.42□□□□□ -0.58
HIPK1-202ENST00000361587 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 SH2B2O14492 632 aaPredicted RBP11.42□□□□□ -0.58
HIPK1-202ENST00000361587 EEF1B2P24534 225 aaKnown RBP11.42□□□□□ -0.58
HIPK1-202ENST00000361587 IFNA8P32881 189 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 TSTA3Q13630 321 aaPredicted RBP11.42□□□□□ -0.58
HIPK1-202ENST00000361587 LRRC24Q50LG9 513 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 LRRC23Q53EV4 343 aaPredicted RBP11.42□□□□□ -0.58
HIPK1-202ENST00000361587 DCLK2Q8N568 766 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 TBCKQ8TEA7 893 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 DCPSQ96C86 337 aaKnown RBP11.42□□□□□ -0.58
HIPK1-202ENST00000361587 VPS39Q96JC1 886 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 SPTLC3Q9NUV7 552 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 SLC13A4Q9UKG4 626 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 SYNGAP1Q96PV0 1343 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 CLASP1Q7Z460 1538 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 WDR64B1ANS9 1081 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 FTCDO95954 541 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 ARHGEF6Q15052 776 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 E2F5Q15329 346 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 PYROXD1Q8WU10 500 aa11.42□□□□□ -0.58
HIPK1-202ENST00000361587 POLR3CQ9BUI4 534 aaPredicted RBP11.42□□□□□ -0.58
HIPK1-202ENST00000361587 TRPA1O75762 1119 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 ZBED1O96006 694 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 ADD2P35612 726 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 TMED8Q6PL24 325 aaPredicted RBP11.41□□□□□ -0.58
HIPK1-202ENST00000361587 SIX6OS1Q8N1H7 587 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 DHX36Q9H2U1 1008 aaKnown RBP11.41□□□□□ -0.58
HIPK1-202ENST00000361587 NRBP1Q9UHY1 535 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 GOLGA8SH3BPF8 625 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 TJP3O95049 919 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 TRIM67Q6ZTA4 783 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 SYT2Q8N9I0 419 aaPredicted RBP11.41□□□□□ -0.58
HIPK1-202ENST00000361587 PI4K2BQ8TCG2 481 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 MXD3Q9BW11 206 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 SCHIP1Q9P0W5 487 aaPredicted RBP11.41□□□□□ -0.58
HIPK1-202ENST00000361587 ATP7AQ04656 1500 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 PSAPP07602 524 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 IGBP1P78318 339 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 MDM2Q00987 491 aaPredicted RBP11.41□□□□□ -0.58
HIPK1-202ENST00000361587 WDR75Q8IWA0 830 aaKnown RBP11.41□□□□□ -0.58
HIPK1-202ENST00000361587 CNPY4Q8N129 248 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 NDUFAF2Q8N183 169 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 ACRBPQ8NEB7 543 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 CFAP36Q96G28 342 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 RBM41Q96IZ5 413 aaKnown RBP11.41□□□□□ -0.58
HIPK1-202ENST00000361587 KLC2Q9H0B6 622 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 NDST4Q9H3R1 872 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 UBN1Q9NPG3 1134 aa11.41□□□□□ -0.58
HIPK1-202ENST00000361587 ATP10AO60312 1499 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms