RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 CCDC175P0C221 793 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 FXR1P51114 621 aaKnown RBP eCLIP12.85□□□□□ -0.35
HPS1-204ENST00000361490 ZNF569Q5MCW4 686 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 GIMAP8Q8ND71 665 aaPredicted RBP12.85□□□□□ -0.35
HPS1-204ENST00000361490 RGS22Q8NE09 1264 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 CCDC127Q96BQ5 260 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 CCDC42Q96M95 316 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 IRX2Q9BZI1 471 aaPredicted RBP12.85□□□□□ -0.35
HPS1-204ENST00000361490 VPS33BQ9H267 617 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
HPS1-204ENST00000361490 NOP56O00567 594 aaKnown RBP12.85□□□□□ -0.35
HPS1-204ENST00000361490 KIF5CO60282 957 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 CDC25BP30305 580 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 MTERF2Q49AM1 385 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 SWSAP1Q6NVH7 229 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 TOGARAM2Q6ZUX3 1019 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 KIAA0895Q8NCT3 520 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 SYTL5Q8TDW5 730 aaPredicted RBP12.85□□□□□ -0.35
HPS1-204ENST00000361490 CEP170P1Q96L14 293 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 RUSC1Q9BVN2 902 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 MLXIPQ9HAP2 919 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 COL4A3BPQ9Y5P4 624 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 SCN9AQ15858 1988 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 PLIN4Q96Q06 1357 aa12.85□□□□□ -0.35
HPS1-204ENST00000361490 MYBP10242 640 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 CYP11B2P19099 503 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 CASQ1P31415 396 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 CNTN2Q02246 1040 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 CYP27A1Q02318 531 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 TEPSINQ96N21 525 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 PSMB7Q99436 277 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 TEX13BQ9BXU2 312 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 UNC45AQ9H3U1 944 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 COL20A1Q9P218 1284 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 ATRNL1Q5VV63 1379 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 GOLGA8IPA6NC78 632 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 DCAF8L1A6NGE4 600 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 GOLGA8JA6NMD2 632 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 ARHGAP6O43182 974 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 PEX3P56589 373 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 SOX10P56693 466 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 CCZ1BP86790 482 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 CCZ1P86791 482 aaPredicted RBP12.84□□□□□ -0.35
HPS1-204ENST00000361490 FKBP3Q00688 224 aaKnown RBP12.84□□□□□ -0.35
HPS1-204ENST00000361490 MCTP2Q6DN12 878 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 NACC1Q96RE7 527 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 C7orf25Q9BPX7 421 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 TFR2Q9UP52 801 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 MYH6P13533 1939 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 CCP110O43303 1012 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 IGBP1P78318 339 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 CAGE1Q8TC20 777 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 MXRA8Q9BRK3 442 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 FGFBP2Q9BYJ0 223 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 GABBR1Q9UBS5 961 aa12.84□□□□□ -0.35
HPS1-204ENST00000361490 ADD3Q9UEY8 706 aaKnown RBP12.84□□□□□ -0.35
HPS1-204ENST00000361490 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.363e-7■■□□□ 14.1
HPS1-204ENST00000361490 ZNF280AP59817 542 aaPredicted RBP12.83□□□□□ -0.36
HPS1-204ENST00000361490 KCNA1Q09470 495 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 PADI6Q6TGC4 694 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 CYFIP1Q7L576 1253 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 KLRG1Q96E93 195 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 PPP2R2CQ9Y2T4 447 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 TTC26A0AVF1 554 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 PHF20L1A8MW92 1017 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 ITGB5P18084 799 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 RPA1P27694 616 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 POLR2FP61218 127 aaKnown RBP12.83□□□□□ -0.36
HPS1-204ENST00000361490 NAA30Q147X3 362 aaPredicted RBP12.83□□□□□ -0.36
HPS1-204ENST00000361490 GNPTABQ3T906 1256 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 TEX35Q5T0J7 233 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 TREML2Q5T2D2 321 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 NSUN6Q8TEA1 469 aaKnown RBP12.83□□□□□ -0.36
HPS1-204ENST00000361490 PPP1R13BQ96KQ4 1090 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 RANBP17Q9H2T7 1088 aaKnown RBP12.83□□□□□ -0.36
HPS1-204ENST00000361490 SEMA6BQ9H3T3 888 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 ACAD9Q9H845 621 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 ARMCX3Q9UH62 379 aaPredicted RBP12.83□□□□□ -0.36
HPS1-204ENST00000361490 IVNS1ABPQ9Y6Y0 642 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 DOCK2Q92608 1830 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 TBC1D12O60347 775 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 DNM2P50570 870 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 KCTD2Q14681 263 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 NT5DC1Q5TFE4 455 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 STXBP4Q6ZWJ1 553 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 ARMC9Q7Z3E5 817 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 KIFC3Q9BVG8 833 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 LSM14BQ9BX40 385 aaKnown RBP12.83□□□□□ -0.36
HPS1-204ENST00000361490 HSD3B7Q9H2F3 369 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 NDST4Q9H3R1 872 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 PARVGQ9HBI0 331 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 AGPAT5Q9NUQ2 364 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 SPTLC3Q9NUV7 552 aa12.83□□□□□ -0.36
HPS1-204ENST00000361490 ARAP2Q8WZ64 1704 aa12.82□□□□□ -0.36
HPS1-204ENST00000361490 OPLAHO14841 1288 aa12.82□□□□□ -0.36
HPS1-204ENST00000361490 KLRC4O43908 158 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms