RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 RBM46Q8TBY0 533 aaKnown RBP14.64□□□□□ -0.07
LDB3-202ENST00000361373 NSUN4Q96CB9 384 aaKnown RBP14.64□□□□□ -0.07
LDB3-202ENST00000361373 PPFIA4O75335 1185 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 TNFAIP2Q03169 654 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 ELMSAN1Q6PJG2 1045 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 HOMER3Q9NSC5 361 aa14.64□□□□□ -0.07
LDB3-202ENST00000361373 ZNF500O60304 480 aaPredicted RBP14.63□□□□□ -0.07
LDB3-202ENST00000361373 U2AF2P26368 475 aaKnown RBP eCLIP14.63□□□□□ -0.07
LDB3-202ENST00000361373 DDIT3P35638 169 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 PPP2R5DQ14738 602 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 HHIPL2Q6UWX4 724 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 EEPD1Q7L9B9 569 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 TRERF1Q96PN7 1200 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 NCAPGQ9BPX3 1015 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 ACAD9Q9H845 621 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 BUB1O43683 1085 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 CIB2O75838 187 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 HOXD10P28358 340 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 APBA1Q02410 837 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 EPSTI1Q96J88 318 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 GCNT4Q9P109 453 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 MNAT1P51948 309 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 KCNV1Q6PIU1 500 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 ZNF148Q9UQR1 794 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 DCCP43146 1447 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 USP17L15C9J2P7 530 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 USP17L13C9JLJ4 530 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 USP17L11C9JVI0 530 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 USP17L18D6R9N7 530 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 USP17L22D6RA61 530 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 USP17L17D6RBQ6 530 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 USP17L19D6RCP7 530 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 USP17L20D6RJB6 530 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 CLIC2O15247 247 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 RGS16O15492 202 aaPredicted RBP14.63□□□□□ -0.07
LDB3-202ENST00000361373 USP17L24Q0WX57 530 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 TTLL4Q14679 1199 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 CTAGE3PQ8IX95 158 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 ZNF653Q96CK0 615 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 NDST4Q9H3R1 872 aa14.63□□□□□ -0.07
LDB3-202ENST00000361373 TOPORSQ9NS56 1045 aaPredicted RBP14.63□□□□□ -0.07
LDB3-202ENST00000361373 IPO11Q9UI26 975 aaKnown RBP14.63□□□□□ -0.07
LDB3-202ENST00000361373 BCORL1Q5H9F3 1711 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 DIP2AQ14689 1571 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 MRRFQ96E11 262 aaKnown RBP14.62□□□□□ -0.07
LDB3-202ENST00000361373 ATF2P15336 505 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 CDC25AP30304 524 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 CTTNQ14247 550 aaKnown RBP14.62□□□□□ -0.07
LDB3-202ENST00000361373 PRPSAP1Q14558 356 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 STYK1Q6J9G0 422 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 KIAA1841Q6NSI8 718 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 ARHGAP24Q8N264 748 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 LPAR1Q92633 364 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 MSTO1Q9BUK6 570 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 P4HBP07237 508 aaKnown RBP14.62□□□□□ -0.07
LDB3-202ENST00000361373 MAPK4P31152 587 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 IRX5P78411 483 aaPredicted RBP14.62□□□□□ -0.07
LDB3-202ENST00000361373 SPZ1Q9BXG8 430 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 MKRN1Q9UHC7 482 aaKnown RBP14.62□□□□□ -0.07
LDB3-202ENST00000361373 RIMBP3CA6NJZ7 1639 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 RIMBP3BA6NNM3 1639 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 RIMBP3Q9UFD9 1639 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 SERPING1P05155 500 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
LDB3-202ENST00000361373 PPFIBP2Q8ND30 876 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 FAM149B1Q96BN6 582 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 C2orf40Q9H1Z8 148 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 LRRC4Q9HBW1 653 aa14.62□□□□□ -0.07
LDB3-202ENST00000361373 RAVER2Q9HCJ3 691 aaKnown RBP14.62□□□□□ -0.07
LDB3-202ENST00000361373 PHKA2P46019 1235 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 RASSF7Q02833 373 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 BIRC2Q13490 618 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 QRICH1Q2TAL8 776 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 SLC44A5Q8NCS7 719 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 FTOQ9C0B1 505 aaKnown RBP eCLIP14.61□□□□□ -0.07
LDB3-202ENST00000361373 PCIF1Q9H4Z3 704 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 LCMT1Q9UIC8 334 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 CTNNA1P35221 906 aaKnown RBP14.61□□□□□ -0.07
LDB3-202ENST00000361373 MAPK6Q16659 721 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 CATSPER4Q7RTX7 472 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 C10orf67Q8IYJ2 551 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 CDC23Q9UJX2 597 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 JRKLQ9Y4A0 524 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 MAP7Q14244 749 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 MUM1L1Q5H9M0 696 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 SMYD4Q8IYR2 804 aaPredicted RBP14.61□□□□□ -0.07
LDB3-202ENST00000361373 NME8Q8N427 588 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 CDKL2Q92772 493 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 ASB14A6NK59 587 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 GRIN3BO60391 1043 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 MESDQ14696 234 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 BSPRYQ5W0U4 402 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 DNAJC24Q6P3W2 148 aa14.61□□□□□ -0.07
LDB3-202ENST00000361373 C17orf53Q8N3J3 647 aaPredicted RBP14.61□□□□□ -0.07
LDB3-202ENST00000361373 CALR3Q96L12 384 aaKnown RBP14.61□□□□□ -0.07
LDB3-202ENST00000361373 SRGAP2BP0DMP2 458 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 STAT3P40763 770 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 EHHADHQ08426 723 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 STMN2Q93045 179 aa14.6□□□□□ -0.07
LDB3-202ENST00000361373 PANX2Q96RD6 677 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms