RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 HAUS4Q9H6D7 363 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 SSX2IPQ9Y2D8 614 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 DAAM2Q86T65 1068 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 FMR1NBQ8N0W7 255 aaPredicted RBP15.14■□□□□ 0.01
CTR9-201ENST00000361367 TCP11Q8WWU5 503 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 ATP6V0A4Q9HBG4 840 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 E7EVH7 732 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 IL1R1P14778 569 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 POLR2BP30876 1174 aaKnown RBP15.14■□□□□ 0.01
CTR9-201ENST00000361367 CFAP221Q4G0U5 840 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 SWSAP1Q6NVH7 229 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 PNMA8AQ86V59 439 aaPredicted RBP15.14■□□□□ 0.01
CTR9-201ENST00000361367 RAD54LQ92698 747 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 PHF20Q9BVI0 1012 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 THAP9Q9H5L6 903 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 GABBR1Q9UBS5 961 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 PPP2R2CQ9Y2T4 447 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 NSFP46459 744 aaKnown RBP15.14■□□□□ 0.01
CTR9-201ENST00000361367 BAATQ14032 418 aaPredicted RBP15.14■□□□□ 0.01
CTR9-201ENST00000361367 PTPN21Q16825 1174 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 SFR1Q86XK3 245 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 FAM107BQ9H098 131 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.14■□□□□ 0.01
CTR9-201ENST00000361367 SPDYE2BA6NHP3 402 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 MYL3P08590 195 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 SPDYE6P0CI01 402 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 SNAPC2Q13487 334 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 C9orf131Q5VYM1 1079 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 FBXO41Q8TF61 875 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 CACTINQ8WUQ7 758 aaKnown RBP15.14■□□□□ 0.01
CTR9-201ENST00000361367 RTFDC1Q9BY42 306 aaPredicted RBP15.14■□□□□ 0.01
CTR9-201ENST00000361367 TRIM31Q9BZY9 425 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 MIS12Q9H081 205 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 GOLPH3LQ9H4A5 285 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 POLD4Q9HCU8 107 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 STIM2Q9P246 746 aa15.14■□□□□ 0.01
CTR9-201ENST00000361367 BZW2Q9Y6E2 419 aaKnown RBP15.14■□□□□ 0.01
CTR9-201ENST00000361367 SMIM23A6NLE4 172 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 FERP16591 822 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 NFX1Q12986 1120 aaKnown RBP15.13■□□□□ 0.01
CTR9-201ENST00000361367 TAF1CQ15572 869 aaPredicted RBP15.13■□□□□ 0.01
CTR9-201ENST00000361367 KLHL7Q8IXQ5 586 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 ANKRD13CQ8N6S4 541 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 PCDHB4Q9Y5E5 795 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 FAM205CA6NFA0 338 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 CAPN9O14815 690 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 LRRN2O75325 713 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 KIAA1524Q8TCG1 905 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 STMN4Q9H169 189 aaPredicted RBP15.13■□□□□ 0.01
CTR9-201ENST00000361367 ZNF302Q9NR11 478 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 ASIC3Q9UHC3 531 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 PVALEFA0A1B0GWK0 134 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 GOLGA8IPA6NC78 632 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 GOLGA8JA6NMD2 632 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 HOXA10P31260 410 aaPredicted RBP15.13■□□□□ 0.01
CTR9-201ENST00000361367 CATSPER4Q7RTX7 472 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 ANKRD13AQ8IZ07 590 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 LRRC4BQ9NT99 713 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 GCNT4Q9P109 453 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 FAM169AQ9Y6X4 670 aa15.13■□□□□ 0.01
CTR9-201ENST00000361367 ADGRB2O60241 1585 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 U2AF2P26368 475 aaKnown RBP eCLIP15.12■□□□□ 0.01
CTR9-201ENST00000361367 CFAP58Q5T655 872 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 SLFN12LQ6IEE8 588 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 GPR161Q8N6U8 529 aaKnown RBP15.12■□□□□ 0.01
CTR9-201ENST00000361367 MAP3K14Q99558 947 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 LXNQ9BS40 222 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 MSTO1Q9BUK6 570 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 NDST4Q9H3R1 872 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 PDS5AQ29RF7 1337 aaKnown RBP15.12■□□□□ 0.01
CTR9-201ENST00000361367 ASB14A6NK59 587 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 TNPO2O14787 897 aaKnown RBP15.12■□□□□ 0.01
CTR9-201ENST00000361367 PSMC5P62195 406 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 TROAPQ12815 778 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 PAIP2Q9BPZ3 127 aaKnown RBP15.12■□□□□ 0.01
CTR9-201ENST00000361367 NXF1Q9UBU9 619 aaKnown RBP15.12■□□□□ 0.01
CTR9-201ENST00000361367 NRBP1Q9UHY1 535 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 SAR1BQ9Y6B6 198 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 ZNF233A6NK53 670 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 BUB1O43683 1085 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 ATP1A3P13637 1013 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 CCDC14Q49A88 953 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 KRT222Q8N1A0 295 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 JMJD4Q9H9V9 463 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 UTP11Q9Y3A2 253 aaKnown RBP15.12■□□□□ 0.01
CTR9-201ENST00000361367 STK10O94804 968 aaKnown RBP15.12■□□□□ 0.01
CTR9-201ENST00000361367 ZNF157P51786 506 aaPredicted RBP15.12■□□□□ 0.01
CTR9-201ENST00000361367 PCDHA10Q9Y5I2 948 aa15.12■□□□□ 0.01
CTR9-201ENST00000361367 SCYL2Q6P3W7 929 aa15.11■□□□□ 0.01
CTR9-201ENST00000361367 SHC4Q6S5L8 630 aa15.11■□□□□ 0.01
CTR9-201ENST00000361367 CCDC105Q8IYK2 499 aa15.11■□□□□ 0.01
CTR9-201ENST00000361367 THNSL1Q8IYQ7 743 aa15.11■□□□□ 0.01
CTR9-201ENST00000361367 PSPC1Q8WXF1 523 aaKnown RBP15.11■□□□□ 0.01
CTR9-201ENST00000361367 ZBTB9Q96C00 473 aa15.11■□□□□ 0.01
CTR9-201ENST00000361367 CCDC94Q9BW85 323 aaPredicted RBP15.11■□□□□ 0.01
CTR9-201ENST00000361367 PODXL2Q9NZ53 605 aa15.11■□□□□ 0.01
CTR9-201ENST00000361367 SALL3Q9BXA9 1300 aa15.11■□□□□ 0.01
CTR9-201ENST00000361367 RASSF7Q02833 373 aa15.11■□□□□ 0.01
CTR9-201ENST00000361367 RBL2Q08999 1139 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms