RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 NOP56O00567 594 aaKnown RBP20.19■□□□□ 0.82
CLK2-202ENST00000361168 LINC00301Q8NCQ3 95 aa20.19■□□□□ 0.82
CLK2-202ENST00000361168 FERMT2Q96AC1 680 aa20.19■□□□□ 0.82
CLK2-202ENST00000361168 PCYT2Q99447 389 aa20.19■□□□□ 0.82
CLK2-202ENST00000361168 TEKT3Q9BXF9 490 aa20.19■□□□□ 0.82
CLK2-202ENST00000361168 POLR3EQ9NVU0 708 aa20.19■□□□□ 0.82
CLK2-202ENST00000361168 ASGR1P07306 291 aa20.19■□□□□ 0.82
CLK2-202ENST00000361168 NCLP19338 710 aaKnown RBP20.19■□□□□ 0.82
CLK2-202ENST00000361168 NASPP49321 788 aaPredicted RBP20.19■□□□□ 0.82
CLK2-202ENST00000361168 TRMT1LQ7Z2T5 733 aaKnown RBP20.19■□□□□ 0.82
CLK2-202ENST00000361168 CCDC60Q8IWA6 550 aaPredicted RBP20.19■□□□□ 0.82
CLK2-202ENST00000361168 SLFN12Q8IYM2 578 aa20.19■□□□□ 0.82
CLK2-202ENST00000361168 GIMAP8Q8ND71 665 aaPredicted RBP20.19■□□□□ 0.82
CLK2-202ENST00000361168 CLIC6Q96NY7 704 aa20.19■□□□□ 0.82
CLK2-202ENST00000361168 TMEM106CQ9BVX2 250 aa20.19■□□□□ 0.82
CLK2-202ENST00000361168 VWA3AA6NCI4 1184 aa20.18■□□□□ 0.82
CLK2-202ENST00000361168 RBAK-RBAKDNI3L0D1 243 aa20.18■□□□□ 0.82
CLK2-202ENST00000361168 SOX10P56693 466 aa20.18■□□□□ 0.82
CLK2-202ENST00000361168 ORC2Q13416 577 aaPredicted RBP20.18■□□□□ 0.82
CLK2-202ENST00000361168 UTP14CQ5TAP6 766 aaKnown RBP20.18■□□□□ 0.82
CLK2-202ENST00000361168 NCAPH2Q6IBW4 605 aa20.18■□□□□ 0.82
CLK2-202ENST00000361168 ABHD15Q6UXT9 468 aa20.18■□□□□ 0.82
CLK2-202ENST00000361168 TNPO1Q92973 898 aaKnown RBP20.18■□□□□ 0.82
CLK2-202ENST00000361168 SAMM50Q9Y512 469 aa20.18■□□□□ 0.82
CLK2-202ENST00000361168 MYH15Q9Y2K3 1946 aa20.18■□□□□ 0.82
CLK2-202ENST00000361168 CCDC85CA6NKD9 419 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 BAG4O95429 457 aaKnown RBP20.17■□□□□ 0.82
CLK2-202ENST00000361168 CHMP4BP1P59074 171 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 NKX3-2P78367 333 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 PPP2R5CQ13362 524 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 SLC39A14Q15043 492 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 UGCGQ16739 394 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 SPECC1Q5M775 1068 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 RNF180Q86T96 592 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 KAT2BQ92831 832 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 C16orf70Q9BSU1 422 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 DISC1Q9NRI5 854 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 RGL1Q9NZL6 768 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 WRAP73Q9P2S5 460 aaPredicted RBP20.17■□□□□ 0.82
CLK2-202ENST00000361168 ELP1O95163 1332 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 ATG7O95352 703 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 MYL3P08590 195 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 CPT1AP50416 773 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 PSMC6P62333 389 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 PURAQ00577 322 aaKnown RBP20.17■□□□□ 0.82
CLK2-202ENST00000361168 SWSAP1Q6NVH7 229 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 SEPT1Q8WYJ6 367 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 ZNF396Q96N95 335 aaPredicted RBP20.17■□□□□ 0.82
CLK2-202ENST00000361168 SPC25Q9HBM1 224 aa20.17■□□□□ 0.82
CLK2-202ENST00000361168 LGALS2P05162 132 aa20.16■□□□□ 0.82
CLK2-202ENST00000361168 HOXD8P13378 290 aaPredicted RBP20.16■□□□□ 0.82
CLK2-202ENST00000361168 ACLYP53396 1101 aa20.16■□□□□ 0.82
CLK2-202ENST00000361168 KRT76Q01546 638 aa20.16■□□□□ 0.82
CLK2-202ENST00000361168 CYP4A11Q02928 519 aa20.16■□□□□ 0.82
CLK2-202ENST00000361168 ZNF746Q6NUN9 644 aaPredicted RBP20.16■□□□□ 0.82
CLK2-202ENST00000361168 USP49Q70CQ1 688 aa20.16■□□□□ 0.82
CLK2-202ENST00000361168 FBXO2Q9UK22 296 aaPredicted RBP20.16■□□□□ 0.82
CLK2-202ENST00000361168 A0A087WWV3 80 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 PPFIA4O75335 1185 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 MARK3P27448 753 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 CST5P28325 142 aaPredicted RBP20.15■□□□□ 0.82
CLK2-202ENST00000361168 STK38Q15208 465 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 DGKDQ16760 1214 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 TPRNQ4KMQ1 711 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 DTHD1Q6ZMT9 781 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 IGSF22Q8N9C0 903 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 BANK1Q8NDB2 785 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 PCDHA10Q9Y5I2 948 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 TCHHQ07283 1943 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 WDR64B1ANS9 1081 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 ATP4AP20648 1035 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 FXR2P51116 673 aaKnown RBP eCLIP20.15■□□□□ 0.825e-9■□□□□ 10
CLK2-202ENST00000361168 MIER3Q7Z3K6 550 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 ARRDC4Q8NCT1 418 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 RNPEPQ9H4A4 650 aa20.15■□□□□ 0.82
CLK2-202ENST00000361168 IGKV6D-21A0A0A0MT36 114 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 DNM1LO00429 736 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 LAD1O00515 517 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 SPTLC2O15270 562 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 ZNF862O60290 1169 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 SUPT20HL2P0C7V6 817 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 PRPHP41219 470 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 ECM1Q16610 540 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 PAWRQ96IZ0 340 aaKnown RBP20.14■□□□□ 0.81
CLK2-202ENST00000361168 CSRNP2Q9H175 543 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 GABBR1Q9UBS5 961 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 CEP131Q9UPN4 1083 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 LAMA2P24043 3122 aaKnown RBP20.14■□□□□ 0.81
CLK2-202ENST00000361168 GRIN2DO15399 1336 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 TMEM150BA6NC51 233 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 BACH1O14867 736 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 ZBTB39O15060 712 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 KRT85P78386 507 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 CTTNQ14247 550 aaKnown RBP20.14■□□□□ 0.81
CLK2-202ENST00000361168 ARL6IP4Q66PJ3 421 aaKnown RBP20.14■□□□□ 0.81
CLK2-202ENST00000361168 LEO1Q8WVC0 666 aaPredicted RBP20.14■□□□□ 0.81
CLK2-202ENST00000361168 SH2D3AQ9BRG2 576 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 RCOR1Q9UKL0 485 aa20.14■□□□□ 0.81
CLK2-202ENST00000361168 RANBP2P49792 3224 aaKnown RBP20.13■□□□□ 0.81
CLK2-202ENST00000361168 A0A1W2PQ45 241 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms