RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 TROVE2P10155 538 aaKnown RBP eCLIP22.86■■□□□ 1.25
SMURF1-201ENST00000361125 PSMD2Q13200 908 aa22.86■■□□□ 1.25
SMURF1-201ENST00000361125 NKX1-1Q15270 411 aaPredicted RBP22.86■■□□□ 1.25
SMURF1-201ENST00000361125 RSPH3Q86UC2 560 aa22.86■■□□□ 1.25
SMURF1-201ENST00000361125 BHMT2Q9H2M3 363 aa22.86■■□□□ 1.25
SMURF1-201ENST00000361125 TACC3Q9Y6A5 838 aa22.86■■□□□ 1.25
SMURF1-201ENST00000361125 CASP1P29466 404 aa22.86■■□□□ 1.25
SMURF1-201ENST00000361125 NXNQ6DKJ4 435 aa22.86■■□□□ 1.25
SMURF1-201ENST00000361125 DYNLT1P63172 113 aa22.86■■□□□ 1.25
SMURF1-201ENST00000361125 PANX2Q96RD6 677 aa22.86■■□□□ 1.25
SMURF1-201ENST00000361125 YWHAGP61981 247 aaKnown RBP eCLIP22.86■■□□□ 1.25
SMURF1-201ENST00000361125 FOXO4P98177 505 aa22.86■■□□□ 1.25
SMURF1-201ENST00000361125 XPOTO43592 962 aaKnown RBP22.85■■□□□ 1.25
SMURF1-201ENST00000361125 CCDC144BQ3MJ40 725 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 SMIM5Q71RC9 77 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 C7orf31Q8N865 590 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 PPP4R1Q8TF05 950 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 SETD1BQ9UPS6 1966 aaKnown RBP22.85■■□□□ 1.25
SMURF1-201ENST00000361125 C4orf50Q6ZRC1 276 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 ABI1Q8IZP0 508 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 PIM2Q9P1W9 311 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 ENAHQ8N8S7 591 aaPredicted RBP22.85■■□□□ 1.25
SMURF1-201ENST00000361125 FAM149B1Q96BN6 582 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 LY9Q9HBG7 655 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 RAVER2Q9HCJ3 691 aaKnown RBP22.85■■□□□ 1.25
SMURF1-201ENST00000361125 TMEM260Q9NX78 707 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 GDAQ9Y2T3 454 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 POLR1AO95602 1720 aaPredicted RBP22.85■■□□□ 1.25
SMURF1-201ENST00000361125 POTEMA6NI47 508 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 POC1B-GALNT4F8VUJ3 575 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 PFKFB3Q16875 520 aaPredicted RBP22.85■■□□□ 1.25
SMURF1-201ENST00000361125 KCTD16Q68DU8 428 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 BANK1Q8NDB2 785 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 LIG3P49916 1009 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 ARL6IP4Q66PJ3 421 aaKnown RBP22.85■■□□□ 1.25
SMURF1-201ENST00000361125 MAP7D3Q8IWC1 876 aa22.85■■□□□ 1.25
SMURF1-201ENST00000361125 USP17L10C9JJH3 530 aa22.84■■□□□ 1.25
SMURF1-201ENST00000361125 CLNS1AP54105 237 aaKnown RBP22.84■■□□□ 1.25
SMURF1-201ENST00000361125 SEPT2Q15019 361 aa22.84■■□□□ 1.25
SMURF1-201ENST00000361125 TULP4Q9NRJ4 1543 aa22.84■■□□□ 1.25
SMURF1-201ENST00000361125 ZBTB5O15062 677 aa22.84■■□□□ 1.25
SMURF1-201ENST00000361125 DCP1AQ9NPI6 582 aaPredicted RBP22.84■■□□□ 1.25
SMURF1-201ENST00000361125 HOMER3Q9NSC5 361 aa22.84■■□□□ 1.25
SMURF1-201ENST00000361125 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.84■■□□□ 1.25
SMURF1-201ENST00000361125 CCDC151A5D8V7 595 aa22.84■■□□□ 1.25
SMURF1-201ENST00000361125 MAGED2Q9UNF1 606 aaPredicted RBP22.84■■□□□ 1.25
SMURF1-201ENST00000361125 PCDHA13Q9Y5I0 950 aa22.84■■□□□ 1.25
SMURF1-201ENST00000361125 KRT1P04264 644 aa22.84■■□□□ 1.25
SMURF1-201ENST00000361125 PEX3P56589 373 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 BBOF1Q8ND07 529 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 TRIM11Q96F44 468 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 USP17L15C9J2P7 530 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 USP17L13C9JLJ4 530 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 USP17L11C9JVI0 530 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 USP17L18D6R9N7 530 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 USP17L22D6RA61 530 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 USP17L17D6RBQ6 530 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 USP17L19D6RCP7 530 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 USP17L20D6RJB6 530 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 USP17L24Q0WX57 530 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 BIRC2Q13490 618 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 USP17L6PQ6QN14 398 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 ARHGAP24Q8N264 748 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 CEP95Q96GE4 821 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 NLRP4Q96MN2 994 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 NDST4Q9H3R1 872 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 EPB41L5Q9HCM4 733 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 MYCP01106 439 aaPredicted RBP22.83■■□□□ 1.25
SMURF1-201ENST00000361125 CDC27P30260 824 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 CCT5P48643 541 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 KRT31Q15323 416 aa22.83■■□□□ 1.25
SMURF1-201ENST00000361125 PNMA6AP0CW24 399 aaPredicted RBP22.83■■□□□ 1.24
SMURF1-201ENST00000361125 ARPP19P56211 112 aa22.83■■□□□ 1.24
SMURF1-201ENST00000361125 MROH7-TTC4A0A0A0MT08 1334 aa22.83■■□□□ 1.24
SMURF1-201ENST00000361125 SERPING1P05155 500 aa22.83■■□□□ 1.24
SMURF1-201ENST00000361125 MB21D1Q8N884 522 aa22.83■■□□□ 1.24
SMURF1-201ENST00000361125 ISCA1Q9BUE6 129 aa22.83■■□□□ 1.24
SMURF1-201ENST00000361125 RFX1P22670 979 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 MXI1P50539 228 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 METTL23Q86XA0 190 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 SPATS2Q86XZ4 545 aaKnown RBP22.82■■□□□ 1.24
SMURF1-201ENST00000361125 SLC10A4Q96EP9 437 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 CFAP57Q96MR6 1250 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 ABCB11O95342 1321 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 MB21D2Q8IYB1 491 aaPredicted RBP22.82■■□□□ 1.24
SMURF1-201ENST00000361125 RRP15Q9Y3B9 282 aaKnown RBP22.82■■□□□ 1.24
SMURF1-201ENST00000361125 ZWINTO95229 277 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 SGO2Q562F6 1265 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 MSTO1Q9BUK6 570 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 ADCY1Q08828 1119 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 TOGARAM2Q6ZUX3 1019 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 EXOC8Q8IYI6 725 aa22.82■■□□□ 1.24
SMURF1-201ENST00000361125 FMR1NBQ8N0W7 255 aaPredicted RBP22.82■■□□□ 1.24
SMURF1-201ENST00000361125 ZSCAN20P17040 1043 aaPredicted RBP22.81■■□□□ 1.24
SMURF1-201ENST00000361125 RNASELQ05823 741 aaKnown RBP22.81■■□□□ 1.24
SMURF1-201ENST00000361125 SLC38A10Q9HBR0 1119 aa22.81■■□□□ 1.24
SMURF1-201ENST00000361125 KLHL14Q9P2G3 628 aa22.81■■□□□ 1.24
SMURF1-201ENST00000361125 UTYO14607 1347 aa22.81■■□□□ 1.24
SMURF1-201ENST00000361125 CYP27A1Q02318 531 aa22.81■■□□□ 1.24
SMURF1-201ENST00000361125 APBA1Q02410 837 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms