RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 KIAA0753Q2KHM9 967 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 KDF1Q8NAX2 398 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 INPP4AQ96PE3 977 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 YME1L1Q96TA2 773 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 PRMT8Q9NR22 394 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 COL1A2P08123 1366 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 BRWD1Q9NSI6 2320 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 RNF113AO15541 343 aaKnown RBP7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 SMIM10L2AP0DMW4 78 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 SMIM10L2BP0DMW5 78 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 PTGS1P23219 599 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 DSC3Q14574 896 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZMYM1Q5SVZ6 1142 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 UIMC1Q96RL1 719 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 RGS18Q9NS28 235 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 IGSF9Q9P2J2 1179 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 KAT6AQ92794 2004 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 TTC41PQ6P2S7 1318 aa7.05□□□□□ -1.28
CDC42SE2-201ENST00000360515 TMEM8BA6NDV4 472 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 INPPL1O15357 1258 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 PAPSS2O95340 614 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 SLC3A2P08195 630 aaKnown RBP7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 ALAS1P13196 640 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 STARD6P59095 220 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 RTN4RL1Q86UN2 441 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZNF444Q8N0Y2 327 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 CPXCR1Q8N123 301 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZBTB44Q8NCP5 570 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 OSBP2Q969R2 916 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 FAM126AQ9BYI3 521 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 COL20A1Q9P218 1284 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 CTDP1Q9Y5B0 961 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 CCDC171Q6TFL3 1326 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 IGSF9BQ9UPX0 1349 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 ANHXE9PGG2 379 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 GOLIM4O00461 696 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 EOMESO95936 686 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 STAG3L1P0CL83 205 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 PPARAQ07869 468 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 DGKHQ86XP1 1220 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 SIRT2Q8IXJ6 389 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 CLASRPQ8N2M8 674 aaKnown RBP7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 KREMEN2Q8NCW0 462 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 GIMAP8Q8ND71 665 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 COPS5Q92905 334 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 PCDHGA2Q9Y5H1 932 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 PIK3CDO00329 1044 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 KRT37O76014 449 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 PMLP29590 882 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 TRAF1Q13077 416 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 MARCH8Q5T0T0 291 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 MAML2Q8IZL2 1156 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZNF687Q8N1G0 1237 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 MRPS27Q92552 414 aaKnown RBP7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 TLR9Q9NR96 1032 aa7.04□□□□□ -1.28
CDC42SE2-201ENST00000360515 TNRC6BQ9UPQ9 1833 aaKnown RBP7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 MLLT6P55198 1093 aaPredicted RBP7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 PDCD11Q14690 1871 aaKnown RBP7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 ANGPT1Q15389 498 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 C15orf39Q6ZRI6 1047 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 TMCO2Q7Z6W1 182 aaPredicted RBP7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 CNTNAP3BQ96NU0 1288 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 GPR20Q99678 358 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 USP26Q9BXU7 913 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 CNTNAP3Q9BZ76 1288 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 MKNK2Q9HBH9 465 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 RXFP3Q9NSD7 469 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZFP37Q9Y6Q3 630 aaPredicted RBP7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 TBC1D4O60343 1298 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 BRD1O95696 1058 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 SMARCA1P28370 1054 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 ODR4Q5SWX8 454 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 KIAA0319Q5VV43 1072 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZC3H14Q6PJT7 736 aaKnown RBP7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 METTL7BQ6UX53 244 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 COLGALT1Q8NBJ5 622 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 ERVK-5Q9HDB9 667 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 AAASQ9NRG9 546 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 ZBTB40Q9NUA8 1239 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 RNF19AQ9NV58 838 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 PLXND1Q9Y4D7 1925 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 LGALS2P05162 132 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 HSPD1P10809 573 aaKnown RBP7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 LAG3P18627 525 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 LMNB2Q03252 620 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 ST3GAL2Q16842 350 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 IFIH1Q9BYX4 1025 aaKnown RBP7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 NOD1Q9Y239 953 aa7.03□□□□□ -1.28
CDC42SE2-201ENST00000360515 IGKV6D-21A0A0A0MT36 114 aa7.02□□□□□ -1.29
CDC42SE2-201ENST00000360515 LILRB3O75022 631 aa7.02□□□□□ -1.29
CDC42SE2-201ENST00000360515 RNF168Q8IYW5 571 aaPredicted RBP7.02□□□□□ -1.29
CDC42SE2-201ENST00000360515 RUBCNQ92622 972 aa7.02□□□□□ -1.29
CDC42SE2-201ENST00000360515 CLDN23Q96B33 292 aa7.02□□□□□ -1.29
CDC42SE2-201ENST00000360515 MAP3K14Q99558 947 aa7.02□□□□□ -1.29
CDC42SE2-201ENST00000360515 PDCD2LQ9BRP1 358 aa7.02□□□□□ -1.29
CDC42SE2-201ENST00000360515 PCDHA2Q9Y5H9 948 aa7.02□□□□□ -1.29
CDC42SE2-201ENST00000360515 SLC30A4O14863 429 aa7.02□□□□□ -1.29
CDC42SE2-201ENST00000360515 GPAA1O43292 621 aa7.02□□□□□ -1.29
CDC42SE2-201ENST00000360515 ATG7O95352 703 aa7.02□□□□□ -1.29
CDC42SE2-201ENST00000360515 SP9P0CG40 484 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms