RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PNMA5Q96PV4 448 aa15.52■□□□□ 0.08
PDLIM5-203ENST00000359265 UIMC1Q96RL1 719 aa15.52■□□□□ 0.08
PDLIM5-203ENST00000359265 PLIN2Q99541 437 aa15.52■□□□□ 0.08
PDLIM5-203ENST00000359265 RIT2Q99578 217 aa15.52■□□□□ 0.08
PDLIM5-203ENST00000359265 MAN1B1Q9UKM7 699 aa15.52■□□□□ 0.08
PDLIM5-203ENST00000359265 VAV3Q9UKW4 847 aa15.52■□□□□ 0.08
PDLIM5-203ENST00000359265 MCM3APO60318 1980 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 ADGRA2Q96PE1 1338 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 IPO5O00410 1097 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 PEX10O60683 326 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 NR3C2P08235 984 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 SARSP49591 514 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 ZNF165P49910 485 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 AMPD3Q01432 767 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 SP3Q02447 781 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 PPP2R5CQ13362 524 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 MTMR1Q13613 665 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 C11orf57Q6ZUT1 292 aaPredicted RBP15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 ANP32BQ92688 251 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 ZFP91Q96JP5 570 aaPredicted RBP15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 GSDMAQ96QA5 445 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 IWS1Q96ST2 819 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 PRDM6Q9NQX0 595 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 KBTBD4Q9NVX7 518 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 ADD3Q9UEY8 706 aaKnown RBP15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 STXBP5LQ9Y2K9 1186 aa15.51■□□□□ 0.07
PDLIM5-203ENST00000359265 ZNF236Q9UL36 1845 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 B4DLN1 442 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 POTEB2H3BUK9 544 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 TLR2O60603 784 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 FCER1AP12319 257 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 XRCC6P12956 609 aaKnown RBP eCLIP15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 KCTD2Q14681 263 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 Q3C1V9 767 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 DPCR1Q3MIW9 517 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 WDR78Q5VTH9 848 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 VSIG10LQ86VR7 867 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 DEFB123Q8N688 67 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 SPATA20Q8TB22 786 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 SH3TC2Q8TF17 1288 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 LARP4BQ92615 738 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 RAD54LQ92698 747 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 STAMQ92783 540 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 GPRASP2Q96D09 838 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 PURBQ96QR8 312 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 MMP19Q99542 508 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 MPHOSPH6Q99547 160 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 LRRC27Q9C0I9 530 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 CBX8Q9HC52 389 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 AGO4Q9HCK5 861 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 KCNH7Q9NS40 1196 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 RMND1Q9NWS8 449 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 TCEAL9Q9UHQ7 104 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 DACH1Q9UI36 760 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 IVNS1ABPQ9Y6Y0 642 aa15.5■□□□□ 0.07
PDLIM5-203ENST00000359265 STRNO43815 780 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 MAPK4P31152 587 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 ALDH5A1P51649 535 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 SEMA3FQ13275 785 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 SV2BQ7L1I2 683 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 UBE2Q1Q7Z7E8 422 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 KCTD17Q8N5Z5 321 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 NEK9Q8TD19 979 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 LRRC15Q8TF66 581 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 CCDC47Q96A33 483 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 CDHR1Q96JP9 859 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 INPP4AQ96PE3 977 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 MTRQ99707 1265 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 NUDT12Q9BQG2 462 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 POLR3CQ9BUI4 534 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 TBC1D22BQ9NU19 505 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 BLOC1S4Q9NUP1 217 aa15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 MYH9P35579 1960 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-203ENST00000359265 MYH11P35749 1972 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 A0A087WWV3 80 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 A0A1W2PPC1 479 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 POTEB3A0JP26 581 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 MAFGO15525 162 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 RPA1P27694 616 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 CUL4BQ13620 913 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 MORC3Q14149 939 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 STXBP2Q15833 593 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 GNPTABQ3T906 1256 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 POTEBQ6S5H4 581 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 ABRAQ8N0Z2 381 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 FAM133AQ8N9E0 248 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 EIF2AK1Q9BQI3 630 aaKnown RBP15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 BPIFA3Q9BQP9 254 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 BLZF1Q9H2G9 400 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 UNC45AQ9H3U1 944 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 TUFT1Q9NNX1 390 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 MTMR10Q9NXD2 777 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 VCANP13611 3396 aa15.48■□□□□ 0.07
PDLIM5-203ENST00000359265 ARID2Q68CP9 1835 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 LOC102724159A0A0B4J2E5 919 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 GOLGA6L19H0YKK7 550 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 EML1O00423 815 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 MGAMO43451 1857 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 CHMP2AO43633 222 aa15.47■□□□□ 0.07
PDLIM5-203ENST00000359265 MED24O75448 989 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms