RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.84■□□□□ 0.77
SHANK1-202ENST00000359082 NACC1Q96RE7 527 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 JRKLQ9Y4A0 524 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 DNAJC8O75937 253 aaPredicted RBP19.84■□□□□ 0.77
SHANK1-202ENST00000359082 CDO1Q16878 200 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 TRIM67Q6ZTA4 783 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 PCGF5Q86SE9 256 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 ZNF589Q86UQ0 364 aaPredicted RBP19.84■□□□□ 0.77
SHANK1-202ENST00000359082 LCA5Q86VQ0 697 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 LRRC4Q9HBW1 653 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 HACD3Q9P035 362 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 WDR17Q8IZU2 1322 aa19.84■□□□□ 0.77
SHANK1-202ENST00000359082 GOLGA8IPA6NC78 632 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 ZNF233A6NK53 670 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 GOLGA8JA6NMD2 632 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 SEMA3EO15041 775 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 PDE8BO95263 885 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 CCNA1P78396 465 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 HSP90AA5PQ58FG0 334 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 GPATCH4Q5T3I0 446 aaKnown RBP19.83■□□□□ 0.77
SHANK1-202ENST00000359082 RPAINQ86UA6 219 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 FBXL13Q8NEE6 735 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 TMEM2Q9UHN6 1383 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 MARK3P27448 753 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 SYDE2Q5VT97 1194 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 KIAA1841Q6NSI8 718 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 FTOQ9C0B1 505 aaKnown RBP eCLIP19.83■□□□□ 0.77
SHANK1-202ENST00000359082 DNAJC17Q9NVM6 304 aaKnown RBP19.83■□□□□ 0.77
SHANK1-202ENST00000359082 A0A1W2PQ27 194 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 A0A1W2PQ64 194 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 A0A1W2PQD8 194 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 EPHB1P54762 984 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 HABP4Q5JVS0 413 aaKnown RBP19.83■□□□□ 0.77
SHANK1-202ENST00000359082 ZMYM1Q5SVZ6 1142 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 FBXO18Q8NFZ0 1043 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 DRC3Q9H069 523 aa19.83■□□□□ 0.77
SHANK1-202ENST00000359082 ATP10DQ9P241 1426 aa19.83■□□□□ 0.76
SHANK1-202ENST00000359082 STAT2P52630 851 aa19.83■□□□□ 0.76
SHANK1-202ENST00000359082 ERFEQ4G0M1 354 aa19.83■□□□□ 0.76
SHANK1-202ENST00000359082 PPP4R4Q6NUP7 873 aa19.83■□□□□ 0.76
SHANK1-202ENST00000359082 MRPL47Q9HD33 250 aaKnown RBP19.83■□□□□ 0.76
SHANK1-202ENST00000359082 PRKAB2O43741 272 aa19.83■□□□□ 0.76
SHANK1-202ENST00000359082 EIF4A3P38919 411 aaKnown RBP19.83■□□□□ 0.76
SHANK1-202ENST00000359082 ANGPTL8Q6UXH0 198 aa19.83■□□□□ 0.76
SHANK1-202ENST00000359082 RMDN2Q96LZ7 410 aa19.83■□□□□ 0.76
SHANK1-202ENST00000359082 BLMP54132 1417 aaPredicted RBP19.83■□□□□ 0.76
SHANK1-202ENST00000359082 MYO1EQ12965 1108 aa19.83■□□□□ 0.76
SHANK1-202ENST00000359082 NNTQ13423 1086 aa19.83■□□□□ 0.76
SHANK1-202ENST00000359082 GINM1Q9NU53 330 aa19.83■□□□□ 0.76
SHANK1-202ENST00000359082 MAP3K7O43318 606 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 KPNA2P52292 529 aaKnown RBP19.82■□□□□ 0.76
SHANK1-202ENST00000359082 FLAD1Q8NFF5 587 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 CNKSR1Q969H4 720 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 RWDD2AQ9UIY3 292 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 HNRNPCL2B2RXH8 293 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 HNRNPCL1O60812 293 aaKnown RBP19.82■□□□□ 0.76
SHANK1-202ENST00000359082 ZNF18P17022 549 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 KRT33BQ14525 404 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 PBKQ96KB5 322 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 RNF26Q9BY78 433 aaPredicted RBP19.82■□□□□ 0.76
SHANK1-202ENST00000359082 CDC25AP30304 524 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 JPH2Q9BR39 696 aaPredicted RBP19.82■□□□□ 0.76
SHANK1-202ENST00000359082 LMCD1Q9NZU5 365 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 EXOC1LA0A1B0GW35 172 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 PLEKHG3A1L390 1219 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 CTNND1O60716 968 aaKnown RBP19.82■□□□□ 0.76
SHANK1-202ENST00000359082 MYCP01106 439 aaPredicted RBP19.82■□□□□ 0.76
SHANK1-202ENST00000359082 APOA5Q6Q788 366 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 RRP15Q9Y3B9 282 aaKnown RBP19.82■□□□□ 0.76
SHANK1-202ENST00000359082 MYOM2P54296 1465 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 SERPING1P05155 500 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 LCORLQ8N3X6 602 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 SAMSN1Q9NSI8 373 aaKnown RBP19.82■□□□□ 0.76
SHANK1-202ENST00000359082 SCHIP1Q9P0W5 487 aaPredicted RBP19.82■□□□□ 0.76
SHANK1-202ENST00000359082 NOVA2Q9UNW9 492 aaKnown RBP19.82■□□□□ 0.76
SHANK1-202ENST00000359082 ADGBQ8N7X0 1667 aa19.82■□□□□ 0.76
SHANK1-202ENST00000359082 MMP1P03956 469 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 TRAPPC10P48553 1259 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 NSUN2Q08J23 767 aaKnown RBP eCLIP19.81■□□□□ 0.76
SHANK1-202ENST00000359082 WDR11Q9BZH6 1224 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 DR1Q01658 176 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 TTC30BQ8N4P2 665 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 NSUN7Q8NE18 718 aaKnown RBP19.81■□□□□ 0.76
SHANK1-202ENST00000359082 ABTB1Q969K4 478 aaPredicted RBP19.81■□□□□ 0.76
SHANK1-202ENST00000359082 SUDS3Q9H7L9 328 aaPredicted RBP19.81■□□□□ 0.76
SHANK1-202ENST00000359082 PHLPP2Q6ZVD8 1323 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 CIAO1O76071 339 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 CTTNQ14247 550 aaKnown RBP19.81■□□□□ 0.76
SHANK1-202ENST00000359082 SLMAPQ14BN4 828 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 FBXO41Q8TF61 875 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 SEC31BQ9NQW1 1179 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 SRGAP2CP0DJJ0 459 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 RWDD4Q6NW29 188 aaKnown RBP19.81■□□□□ 0.76
SHANK1-202ENST00000359082 TDRD7Q8NHU6 1098 aaKnown RBP19.81■□□□□ 0.76
SHANK1-202ENST00000359082 ADD3Q9UEY8 706 aaKnown RBP19.81■□□□□ 0.76
SHANK1-202ENST00000359082 KRT10P13645 584 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 DYNLL2Q96FJ2 89 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 EFHD1Q9BUP0 239 aa19.81■□□□□ 0.76
SHANK1-202ENST00000359082 KIF19Q2TAC6 998 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms