RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 PLA2G4DQ86XP0 818 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 CPXCR1Q8N123 301 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 CHST13Q8NET6 341 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 DIS3LQ8TF46 1054 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 NOC3LQ8WTT2 800 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 CDHR1Q96JP9 859 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 RIT2Q99578 217 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 IMPACTQ9P2X3 320 aa12.01□□□□□ -0.49
TRAPPC4-201ENST00000359005 TRIOBPQ9H2D6 2365 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 RBBP6Q7Z6E9 1792 aaKnown RBP12□□□□□ -0.49
TRAPPC4-201ENST00000359005 A0A087X0B3 334 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 H0YGN5 161 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 PSMA7O14818 248 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 IGHA2P01877 340 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 MAPK4P31152 587 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 GSDMDP57764 484 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 ASIC1P78348 528 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 CACNB2Q08289 660 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-201ENST00000359005 PCNX4Q63HM2 1172 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 RNF207Q6ZRF8 634 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 NLRX1Q86UT6 975 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 ZSCAN30Q86W11 494 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 NPLOC4Q8TAT6 608 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 RAD54LQ92698 747 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 ERCC4Q92889 916 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-201ENST00000359005 ATG4CQ96DT6 458 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 DHTKD1Q96HY7 919 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-201ENST00000359005 AGBL1Q96MI9 1066 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 NUDT12Q9BQG2 462 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 POLR3CQ9BUI4 534 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-201ENST00000359005 TEKT3Q9BXF9 490 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 MOV10L1Q9BXT6 1211 aaKnown RBP12□□□□□ -0.49
TRAPPC4-201ENST00000359005 XRN2Q9H0D6 950 aaKnown RBP eCLIP12□□□□□ -0.49
TRAPPC4-201ENST00000359005 ACAD9Q9H845 621 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 RAVER2Q9HCJ3 691 aaKnown RBP12□□□□□ -0.49
TRAPPC4-201ENST00000359005 TBC1D22BQ9NU19 505 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 ADAMTS5Q9UNA0 930 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 DNM3Q9UQ16 869 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 LOC285556D6RIA3 1793 aa12□□□□□ -0.49
TRAPPC4-201ENST00000359005 MYH7BA7E2Y1 1941 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 DKC1O60832 514 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 GAS7O60861 476 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 COBLO75128 1261 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 RHOBTB3O94955 611 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 TFRCP02786 760 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 HMGCRP04035 888 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 PRR29P0C7W0 189 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 XRCC5P13010 732 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 RPA1P27694 616 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 CCND2P30279 289 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 CCND3P30281 292 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 PAK1Q13153 545 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 TMEM119Q4V9L6 283 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 COBLL1Q53SF7 1204 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 LRCH2Q5VUJ6 765 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 ARHGEF16Q5VV41 709 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 SPATA1Q5VX52 437 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 ISM2Q6H9L7 571 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 SNRNP48Q6IEG0 339 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 FAM114A1Q8IWE2 563 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 CCDC65Q8IXS2 484 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 ETNPPLQ8TBG4 499 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 HAS1Q92839 578 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 MXRA8Q9BRK3 442 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 ZNF577Q9BSK1 485 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 TUFT1Q9NNX1 390 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 RNF146Q9NTX7 359 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 RWDD2AQ9UIY3 292 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 PFASO15067 1338 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 ZNF536O15090 1300 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 SYNRGQ9UMZ2 1314 aa11.99□□□□□ -0.49
TRAPPC4-201ENST00000359005 RPTORQ8N122 1335 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 POTEMA6NI47 508 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 PP2D1A8MPX8 630 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 MEIS1O00470 390 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 OPLAHO14841 1288 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 FARP2O94887 1054 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 SLC25A27O95847 323 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 KRT18P05783 430 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 PRKCSHP14314 528 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 CDC25AP30304 524 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 STAT3P40763 770 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 MAP2K5Q13163 448 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 GRB10Q13322 594 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 PPP2R5CQ13362 524 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 CUL4BQ13620 913 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 TMEM132BQ14DG7 1078 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 WDR78Q5VTH9 848 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 LHX8Q68G74 356 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 NCAPH2Q6IBW4 605 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 UNC13DQ70J99 1090 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 GRAMD1CQ8IYS0 662 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 TRPV1Q8NER1 839 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 NSUN6Q8TEA1 469 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 SLC5A5Q92911 643 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 PAWRQ96IZ0 340 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 TRIM9Q9C026 710 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 SPATC1LQ9H0A9 340 aa11.98□□□□□ -0.49
TRAPPC4-201ENST00000359005 KCND2Q9NZV8 630 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms