RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 SMARCC2Q8TAQ2 1214 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 PIK3R5Q8WYR1 880 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 MRPS27Q92552 414 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 RPGRQ92834 1020 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 CCDC114Q96M63 670 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 ZFP64Q9NPA5 681 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 SH3GLB2Q9NR46 395 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 HDAC9Q9UKV0 1011 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 TPX2Q9ULW0 747 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 PCDHA7Q9UN72 937 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 ATP6V0A2Q9Y487 856 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 RBM8AQ9Y5S9 174 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 RBBP6Q7Z6E9 1792 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 GAKO14976 1311 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 TNRC18O15417 2968 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 MYH1P12882 1939 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 SOWAHDA6NJG2 315 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 A6NNZ2 444 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 ZEB2O60315 1214 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 RTN3O95197 1032 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 PYGLP06737 847 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 FAM163BP0C2L3 166 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 MCM3P25205 808 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 USP14P54578 494 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 EIF6P56537 245 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 MYL5Q02045 173 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 CHRNDQ07001 517 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 IFT88Q13099 833 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 PDCLQ13371 301 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 HLFQ16534 295 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 TUBB8Q3ZCM7 444 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 ACCSLQ4AC99 568 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 ARTNQ5T4W7 220 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 NAA35Q5VZE5 725 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 ADALQ6DHV7 355 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 NCAPH2Q6IBW4 605 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 HHIPL2Q6UWX4 724 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 NFXL1Q6ZNB6 911 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 RTKN2Q8IZC4 609 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 SLC35F6Q8N357 371 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 TCP11Q8WWU5 503 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 JDP2Q8WYK2 163 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 PSMD1Q99460 953 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 DBNDD2Q9BQY9 259 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 PAGR1Q9BTK6 254 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 SELENOOQ9BVL4 669 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 CRNKL1Q9BZJ0 848 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 SIL1Q9H173 461 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 GREM2Q9H772 168 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 SLC39A2Q9NP94 309 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 INTS13Q9NVM9 706 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 NEDD4P46934 1319 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 TAF1P21675 1872 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 GOLGA6L7A0A1B0GV03 622 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 GOLGA8KD6RF30 607 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 ATP5J2-PTCD1G3V325 749 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 ZMYND10O75800 440 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 CELF2O95319 508 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 HIBADHP31937 336 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 NOVP48745 357 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 FKBP4Q02790 459 aaKnown RBP eCLIP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 NFIXQ14938 502 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 CCDC181Q5TID7 509 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 SPECC1LQ69YQ0 1117 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 MIS18BP1Q6P0N0 1132 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 BZW1Q7L1Q6 419 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 ANKRD23Q86SG2 305 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 SAPCD2Q86UD0 394 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 MTMR14Q8NCE2 650 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 ZNF396Q96N95 335 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 NAPGQ99747 312 aaPredicted RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 CHCHD3Q9NX63 227 aaKnown RBP4.42□□□□□ -1.7
CNGA1-201ENST00000358519 LMCD1Q9NZU5 365 aa4.42□□□□□ -1.7
CNGA1-201ENST00000358519 MYH2Q9UKX2 1941 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 UNCXA6NJT0 531 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 PES1O00541 588 aaKnown RBP4.41□□□□□ -1.7
CNGA1-201ENST00000358519 ZNF213O14771 459 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 COBLO75128 1261 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 PPFIA2O75334 1257 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 ABL1P00519 1130 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 XBP1P17861 261 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 DRP2Q13474 957 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 FILIP1LQ4L180 1135 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 HSP90AA4PQ58FG1 418 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 RAD9BQ6WBX8 426 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 SYNE3Q6ZMZ3 975 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 GSPT2Q8IYD1 628 aaKnown RBP4.41□□□□□ -1.7
CNGA1-201ENST00000358519 RASSF8Q8NHQ8 419 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 ZNF473Q8WTR7 871 aaKnown RBP4.41□□□□□ -1.7
CNGA1-201ENST00000358519 NSMCE1Q8WV22 266 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 TBC1D31Q96DN5 1066 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 SPAG5Q96R06 1193 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 YIPF3Q9GZM5 350 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 EPN3Q9H201 632 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 DHX36Q9H2U1 1008 aaKnown RBP4.41□□□□□ -1.7
CNGA1-201ENST00000358519 HAUS2Q9NVX0 235 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 RTEL1Q9NZ71 1219 aa4.41□□□□□ -1.7
CNGA1-201ENST00000358519 GGA1Q9UJY5 639 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms