RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 GJA9P57773 515 aa17.17■□□□□ 0.34
TPM1-206ENST00000358278 ACTR2P61160 394 aa17.17■□□□□ 0.34
TPM1-206ENST00000358278 PPP2R5CQ13362 524 aa17.17■□□□□ 0.34
TPM1-206ENST00000358278 FSCN1Q16658 493 aaKnown RBP17.17■□□□□ 0.34
TPM1-206ENST00000358278 NCAPH2Q6IBW4 605 aa17.17■□□□□ 0.34
TPM1-206ENST00000358278 SMAP1Q8IYB5 467 aaPredicted RBP17.17■□□□□ 0.34
TPM1-206ENST00000358278 FERMT2Q96AC1 680 aa17.17■□□□□ 0.34
TPM1-206ENST00000358278 WDR64B1ANS9 1081 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 CCNE2O96020 404 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 SFNP31947 248 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 FXR2P51116 673 aaKnown RBP eCLIP17.16■□□□□ 0.34
TPM1-206ENST00000358278 JAK3P52333 1124 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 LHX8Q68G74 356 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 MIER3Q7Z3K6 550 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 LEO1Q8WVC0 666 aaPredicted RBP17.16■□□□□ 0.34
TPM1-206ENST00000358278 UPF3AQ9H1J1 476 aaKnown RBP17.16■□□□□ 0.34
TPM1-206ENST00000358278 PPP6R2O75170 966 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 MMP3P08254 477 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 ME1P48163 572 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 BEX3Q00994 111 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 SPIRE1Q08AE8 756 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 GNASQ5JWF2 1037 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 COL13A1Q5TAT6 717 aaPredicted RBP17.16■□□□□ 0.34
TPM1-206ENST00000358278 RNF180Q86T96 592 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 KRI1Q8N9T8 703 aaKnown RBP17.16■□□□□ 0.34
TPM1-206ENST00000358278 SEPT1Q8WYJ6 367 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 GPR20Q99678 358 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 TMEM106CQ9BVX2 250 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 GDPD2Q9HCC8 539 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 DISC1Q9NRI5 854 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 TELO2Q9Y4R8 837 aa17.16■□□□□ 0.34
TPM1-206ENST00000358278 MORC2Q9Y6X9 1032 aaPredicted RBP17.16■□□□□ 0.34
TPM1-206ENST00000358278 MYADML2A6NDP7 307 aa17.15■□□□□ 0.34
TPM1-206ENST00000358278 A6NJR5 290 aa17.15■□□□□ 0.34
TPM1-206ENST00000358278 ADAMTS4O75173 837 aa17.15■□□□□ 0.34
TPM1-206ENST00000358278 TCF7P36402 384 aaPredicted RBP17.15■□□□□ 0.34
TPM1-206ENST00000358278 IRX5P78411 483 aaPredicted RBP17.15■□□□□ 0.34
TPM1-206ENST00000358278 IL17AQ16552 155 aa17.15■□□□□ 0.34
TPM1-206ENST00000358278 DGKDQ16760 1214 aa17.15■□□□□ 0.34
TPM1-206ENST00000358278 MIS18BP1Q6P0N0 1132 aa17.15■□□□□ 0.34
TPM1-206ENST00000358278 LRWD1Q9UFC0 647 aa17.15■□□□□ 0.34
TPM1-206ENST00000358278 FBXO2Q9UK22 296 aaPredicted RBP17.15■□□□□ 0.34
TPM1-206ENST00000358278 RCOR1Q9UKL0 485 aa17.15■□□□□ 0.34
TPM1-206ENST00000358278 PCDHA10Q9Y5I2 948 aa17.15■□□□□ 0.34
TPM1-206ENST00000358278 SRPRBQ9Y5M8 271 aaKnown RBP17.15■□□□□ 0.34
TPM1-206ENST00000358278 SCN10AQ9Y5Y9 1956 aa17.14■□□□□ 0.34
TPM1-206ENST00000358278 POTEFA5A3E0 1075 aa17.14■□□□□ 0.33
TPM1-206ENST00000358278 BACH1O14867 736 aa17.14■□□□□ 0.33
TPM1-206ENST00000358278 ZEB2O60315 1214 aa17.14■□□□□ 0.33
TPM1-206ENST00000358278 PSAPP07602 524 aa17.14■□□□□ 0.33
TPM1-206ENST00000358278 GJB1P08034 283 aa17.14■□□□□ 0.33
TPM1-206ENST00000358278 B3GNT9Q6UX72 402 aa17.14■□□□□ 0.33
TPM1-206ENST00000358278 IGSF22Q8N9C0 903 aa17.14■□□□□ 0.33
TPM1-206ENST00000358278 ARRDC4Q8NCT1 418 aa17.14■□□□□ 0.33
TPM1-206ENST00000358278 RDM1Q8NG50 284 aa17.14■□□□□ 0.33
TPM1-206ENST00000358278 U2AF1L4Q8WU68 220 aaKnown RBP17.14■□□□□ 0.33
TPM1-206ENST00000358278 ARID2Q68CP9 1835 aa17.14■□□□□ 0.33
TPM1-206ENST00000358278 GSTTP1A0A1W2PQM5 241 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 EML1O00423 815 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 SUPT20HL2P0C7V6 817 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 LONP1P36776 959 aaKnown RBP17.13■□□□□ 0.33
TPM1-206ENST00000358278 GRIN1Q05586 938 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 PDIA5Q14554 519 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 LRRC41Q15345 812 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 CSPP1Q1MSJ5 1256 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 UTP14CQ5TAP6 766 aaKnown RBP17.13■□□□□ 0.33
TPM1-206ENST00000358278 PCSK9Q8NBP7 692 aaKnown RBP17.13■□□□□ 0.33
TPM1-206ENST00000358278 ERMNQ8TAM6 284 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 CLIC6Q96NY7 704 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 AZI2Q9H6S1 392 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 MKI67P46013 3256 aaKnown RBP17.13■□□□□ 0.33
TPM1-206ENST00000358278 KBTBD13C9JR72 458 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 CTAGE5O15320 804 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 PPFIA4O75335 1185 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 SGPL1O95470 568 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 MYL3P08590 195 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 ZNF286BP0CG31 522 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 CST5P28325 142 aaPredicted RBP17.13■□□□□ 0.33
TPM1-206ENST00000358278 NKX3-2P78367 333 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 HAUS3Q68CZ6 603 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 ABHD15Q6UXT9 468 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 AK8Q96MA6 479 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 GBP4Q96PP9 640 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 CSRNP2Q9H175 543 aa17.13■□□□□ 0.33
TPM1-206ENST00000358278 TRIP12Q14669 1992 aaPredicted RBP17.13■□□□□ 0.33
TPM1-206ENST00000358278 EMSYQ7Z589 1322 aa17.12■□□□□ 0.33
TPM1-206ENST00000358278 ATG7O95352 703 aa17.12■□□□□ 0.33
TPM1-206ENST00000358278 TFRCP02786 760 aaKnown RBP17.12■□□□□ 0.33
TPM1-206ENST00000358278 LGALS2P05162 132 aa17.12■□□□□ 0.33
TPM1-206ENST00000358278 HOXD8P13378 290 aaPredicted RBP17.12■□□□□ 0.33
TPM1-206ENST00000358278 EPHA7Q15375 998 aa17.12■□□□□ 0.33
TPM1-206ENST00000358278 FAM160B1Q5W0V3 765 aa17.12■□□□□ 0.33
TPM1-206ENST00000358278 TRIM50Q86XT4 487 aa17.12■□□□□ 0.33
TPM1-206ENST00000358278 CCDC60Q8IWA6 550 aaPredicted RBP17.12■□□□□ 0.33
TPM1-206ENST00000358278 KLHDC9Q8NEP7 349 aa17.12■□□□□ 0.33
TPM1-206ENST00000358278 GLG1Q92896 1179 aa17.12■□□□□ 0.33
TPM1-206ENST00000358278 EIF2AK1Q9BQI3 630 aaKnown RBP17.12■□□□□ 0.33
TPM1-206ENST00000358278 ZNF302Q9NR11 478 aa17.12■□□□□ 0.33
TPM1-206ENST00000358278 OGDHLQ9ULD0 1010 aa17.12■□□□□ 0.33
TPM1-206ENST00000358278 PCDHA7Q9UN72 937 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms