RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 SCFD1Q8WVM8 642 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 EXOC4Q96A65 974 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 KRT12Q99456 494 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 TSGA10Q9BZW7 698 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 COA1Q9GZY4 146 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 DNM3Q9UQ16 869 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 AFF2P51816 1311 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 ROBO3Q96MS0 1386 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 CYP11B2P19099 503 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 ACTN2P35609 894 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 CASP4P49662 377 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 PRPF4BQ13523 1007 aaKnown RBP9.1□□□□□ -0.95
CD46-205ENST00000358170 PDIA5Q14554 519 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 LLGL1Q15334 1064 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 GPATCH4Q5T3I0 446 aaKnown RBP9.1□□□□□ -0.95
CD46-205ENST00000358170 IQCEQ6IPM2 695 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 AFAP1L1Q8TED9 768 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 UBXN6Q9BZV1 441 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 HPCAL4Q9UM19 191 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 KCNK3O14649 394 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 ZEB2O60315 1214 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 TLR2O60603 784 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 GABPAQ06546 454 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 ASIC2Q16515 512 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 CRY2Q49AN0 593 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 NAA35Q5VZE5 725 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 BAP1Q92560 729 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 P2RX7Q99572 595 aaKnown RBP9.1□□□□□ -0.95
CD46-205ENST00000358170 AP1M1Q9BXS5 423 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 LRRC27Q9C0I9 530 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 FAM107BQ9H098 131 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 EPB41L5Q9HCM4 733 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 NFU1Q9UMS0 254 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 GAKO14976 1311 aa9.1□□□□□ -0.95
CD46-205ENST00000358170 ESYT2A0FGR8 921 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 GOLGA6CA6NDK9 693 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 POLRMTO00411 1230 aaKnown RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 CEP104O60308 925 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 TBCAO75347 108 aaKnown RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 GOLGA6DP0CG33 693 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 PPP1R2P41236 205 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 IRX5P78411 483 aaPredicted RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 SF3A3Q12874 501 aaKnown RBP eCLIP9.09□□□□□ -0.951e-6■■■■□ 20.9
CD46-205ENST00000358170 ZC2HC1CQ53FD0 456 aaPredicted RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 MIGA2Q7L4E1 593 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 FBXO11Q86XK2 927 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 SH2D3CQ8N5H7 860 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 FAM71BQ8TC56 605 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 REEP2Q9BRK0 252 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 TRIM31Q9BZY9 425 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 DNAJC18Q9H819 358 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 QTRT2Q9H974 415 aaKnown RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 GOLGA6AQ9NYA3 693 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 ARMCX3Q9UH62 379 aaPredicted RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 HDAC9Q9UKV0 1011 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 FAM86B1E9PN63 330 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 FAM86B2P0C5J1 330 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 ABCB4P21439 1286 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 CHRNA5P30532 468 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 CYP2J2P51589 502 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 MYCT1Q8N699 235 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 TAF4BQ92750 862 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 FAM163AQ96GL9 167 aaPredicted RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 TLR10Q9BXR5 811 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 NT5C3AQ9H0P0 336 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 CWC15Q9P013 229 aaKnown RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 ATP6V0A2Q9Y487 856 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 SYF2O95926 243 aaKnown RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 NMT1P30419 496 aaKnown RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 USP8P40818 1118 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 ECE1P42892 770 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 CARSP49589 748 aaKnown RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 ABCB5Q2M3G0 1257 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 CERS3Q8IU89 383 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 SP8Q8IXZ3 490 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 DHX36Q9H2U1 1008 aaKnown RBP9.09□□□□□ -0.95
CD46-205ENST00000358170 VEZTQ9HBM0 779 aa9.09□□□□□ -0.95
CD46-205ENST00000358170 BCCIPQ9P287 314 aaKnown RBP eCLIP9.09□□□□□ -0.95
CD46-205ENST00000358170 NOL4O94818 638 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 CLSTN1O94985 981 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 NDUFB10O96000 172 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 KRT14P02533 472 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 ARHGAP44Q17R89 818 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 TMEM119Q4V9L6 283 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 ARSHQ5FYA8 562 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 PPP4R3AQ6IN85 833 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 WDR93Q6P2C0 686 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 FNBP4Q8N3X1 1017 aaPredicted RBP9.08□□□□□ -0.96
CD46-205ENST00000358170 AMNQ9BXJ7 453 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 CHORDC1Q9UHD1 332 aaPredicted RBP9.08□□□□□ -0.96
CD46-205ENST00000358170 GFPT2O94808 682 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 HEXIM1O94992 359 aaKnown RBP9.08□□□□□ -0.96
CD46-205ENST00000358170 GLI1P08151 1106 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 TCP1P17987 556 aaKnown RBP9.08□□□□□ -0.96
CD46-205ENST00000358170 MCM3P25205 808 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 TUBB4BP68371 445 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 JAG1P78504 1218 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 PTK2Q05397 1052 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 AOC3Q16853 763 aa9.08□□□□□ -0.96
CD46-205ENST00000358170 EXOC3L4Q17RC7 722 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms