RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 SLC12A3P55017 1021 aa19.07■□□□□ 0.64
TPM1-205ENST00000357980 ASIC1P78348 528 aa19.07■□□□□ 0.64
TPM1-205ENST00000357980 NCAPHQ15003 741 aa19.07■□□□□ 0.64
TPM1-205ENST00000357980 ZNF658Q5TYW1 1059 aaPredicted RBP19.07■□□□□ 0.64
TPM1-205ENST00000357980 NEK9Q8TD19 979 aa19.07■□□□□ 0.64
TPM1-205ENST00000357980 HHIPL1Q96JK4 782 aa19.07■□□□□ 0.64
TPM1-205ENST00000357980 LRRC27Q9C0I9 530 aa19.07■□□□□ 0.64
TPM1-205ENST00000357980 WRAP73Q9P2S5 460 aaPredicted RBP19.07■□□□□ 0.64
TPM1-205ENST00000357980 DACH1Q9UI36 760 aa19.07■□□□□ 0.64
TPM1-205ENST00000357980 DNM3Q9UQ16 869 aa19.07■□□□□ 0.64
TPM1-205ENST00000357980 ZNF236Q9UL36 1845 aa19.06■□□□□ 0.64
TPM1-205ENST00000357980 NFASCO94856 1347 aa19.06■□□□□ 0.64
TPM1-205ENST00000357980 TMEM88BA6NKF7 163 aa19.06■□□□□ 0.64
TPM1-205ENST00000357980 BECN2A8MW95 431 aa19.06■□□□□ 0.64
TPM1-205ENST00000357980 IKBKBO14920 756 aa19.06■□□□□ 0.64
TPM1-205ENST00000357980 TOMM70O94826 608 aa19.06■□□□□ 0.64
TPM1-205ENST00000357980 CCNE2O96020 404 aa19.06■□□□□ 0.64
TPM1-205ENST00000357980 CD44P16070 742 aaKnown RBP19.06■□□□□ 0.64
TPM1-205ENST00000357980 KRT76Q01546 638 aa19.06■□□□□ 0.64
TPM1-205ENST00000357980 CTTNQ14247 550 aaKnown RBP19.06■□□□□ 0.64
TPM1-205ENST00000357980 CT47A1Q5JQC4 288 aaPredicted RBP19.06■□□□□ 0.64
TPM1-205ENST00000357980 MIER3Q7Z3K6 550 aa19.06■□□□□ 0.64
TPM1-205ENST00000357980 SMYD4Q8IYR2 804 aaPredicted RBP19.06■□□□□ 0.64
TPM1-205ENST00000357980 ABRAQ8N0Z2 381 aa19.06■□□□□ 0.64
TPM1-205ENST00000357980 DDX12PQ92771 950 aa19.06■□□□□ 0.64
TPM1-205ENST00000357980 LOC102724159A0A0B4J2E5 919 aa19.05■□□□□ 0.64
TPM1-205ENST00000357980 PPP1R3GB7ZBB8 358 aa19.05■□□□□ 0.64
TPM1-205ENST00000357980 INHBEP58166 350 aa19.05■□□□□ 0.64
TPM1-205ENST00000357980 PDE4DQ08499 809 aa19.05■□□□□ 0.64
TPM1-205ENST00000357980 PWP2Q15269 919 aaKnown RBP19.05■□□□□ 0.64
TPM1-205ENST00000357980 IFNL1Q8IU54 200 aa19.05■□□□□ 0.64
TPM1-205ENST00000357980 TPH2Q8IWU9 490 aa19.05■□□□□ 0.64
TPM1-205ENST00000357980 SYT2Q8N9I0 419 aaPredicted RBP19.05■□□□□ 0.64
TPM1-205ENST00000357980 MORC4Q8TE76 937 aa19.05■□□□□ 0.64
TPM1-205ENST00000357980 CCDC102AQ96A19 550 aa19.05■□□□□ 0.64
TPM1-205ENST00000357980 DNAJC19Q96DA6 116 aa19.05■□□□□ 0.64
TPM1-205ENST00000357980 SENP7Q9BQF6 1050 aa19.05■□□□□ 0.64
TPM1-205ENST00000357980 LXNQ9BS40 222 aa19.05■□□□□ 0.64
TPM1-205ENST00000357980 ABT1Q9ULW3 272 aaKnown RBP19.05■□□□□ 0.64
TPM1-205ENST00000357980 PVALEFA0A1B0GWK0 134 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 B4DLN1 442 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 GOLGA6L19H0YKK7 550 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 AP5Z1O43299 807 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 EYA4O95677 639 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 CYP11B2P19099 503 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 ZNF746Q6NUN9 644 aaPredicted RBP19.04■□□□□ 0.64
TPM1-205ENST00000357980 WDR64B1ANS9 1081 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 STRNO43815 780 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 P4HBP07237 508 aaKnown RBP19.04■□□□□ 0.64
TPM1-205ENST00000357980 ERCC5P28715 1186 aaPredicted RBP19.04■□□□□ 0.64
TPM1-205ENST00000357980 SFNP31947 248 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 JAK3P52333 1124 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 MYL5Q02045 173 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 SP2Q02086 613 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 EHHADHQ08426 723 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 ARSHQ5FYA8 562 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 UNC13DQ70J99 1090 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 DYMQ7RTS9 669 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 GPBP1Q86WP2 473 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 BANK1Q8NDB2 785 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 RDM1Q8NG50 284 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 ANP32BQ92688 251 aaKnown RBP19.04■□□□□ 0.64
TPM1-205ENST00000357980 MED15Q96RN5 788 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 GDAQ9Y2T3 454 aa19.04■□□□□ 0.64
TPM1-205ENST00000357980 SSBP05455 408 aaKnown RBP eCLIP19.03■□□□□ 0.64
TPM1-205ENST00000357980 ADORA2AP29274 412 aa19.03■□□□□ 0.64
TPM1-205ENST00000357980 GIMAP8Q8ND71 665 aaPredicted RBP19.03■□□□□ 0.64
TPM1-205ENST00000357980 PDLIM2Q96JY6 352 aa19.03■□□□□ 0.64
TPM1-205ENST00000357980 MPHOSPH6Q99547 160 aaKnown RBP19.03■□□□□ 0.64
TPM1-205ENST00000357980 HSD3B7Q9H2F3 369 aa19.03■□□□□ 0.64
TPM1-205ENST00000357980 BHMT2Q9H2M3 363 aa19.03■□□□□ 0.64
TPM1-205ENST00000357980 BCAS3Q9H6U6 928 aa19.03■□□□□ 0.64
TPM1-205ENST00000357980 EXOC1Q9NV70 894 aa19.03■□□□□ 0.64
TPM1-205ENST00000357980 SMTNL1A8MU46 457 aa19.02■□□□□ 0.64
TPM1-205ENST00000357980 TAF1CQ15572 869 aaPredicted RBP19.02■□□□□ 0.64
TPM1-205ENST00000357980 ZNF792Q3KQV3 632 aa19.02■□□□□ 0.64
TPM1-205ENST00000357980 SEPT14Q6ZU15 432 aa19.02■□□□□ 0.64
TPM1-205ENST00000357980 GPR142Q7Z601 462 aa19.02■□□□□ 0.64
TPM1-205ENST00000357980 PIGOQ8TEQ8 1089 aa19.02■□□□□ 0.64
TPM1-205ENST00000357980 CCDC47Q96A33 483 aaKnown RBP19.02■□□□□ 0.64
TPM1-205ENST00000357980 JPH1Q9HDC5 661 aaPredicted RBP19.02■□□□□ 0.64
TPM1-205ENST00000357980 TCEAL9Q9UHQ7 104 aa19.02■□□□□ 0.64
TPM1-205ENST00000357980 SAMM50Q9Y512 469 aa19.02■□□□□ 0.64
TPM1-205ENST00000357980 COBLO75128 1261 aa19.02■□□□□ 0.63
TPM1-205ENST00000357980 MAPK4P31152 587 aa19.02■□□□□ 0.63
TPM1-205ENST00000357980 GRB14Q14449 540 aa19.02■□□□□ 0.63
TPM1-205ENST00000357980 SMAP1Q8IYB5 467 aaPredicted RBP19.02■□□□□ 0.63
TPM1-205ENST00000357980 ENOX1Q8TC92 643 aaKnown RBP19.02■□□□□ 0.63
TPM1-205ENST00000357980 NACC1Q96RE7 527 aa19.02■□□□□ 0.63
TPM1-205ENST00000357980 PPP1R9BQ96SB3 815 aa19.02■□□□□ 0.63
TPM1-205ENST00000357980 GTPBP4Q9BZE4 634 aaKnown RBP19.02■□□□□ 0.63
TPM1-205ENST00000357980 ZSWIM4Q9H7M6 989 aa19.02■□□□□ 0.63
TPM1-205ENST00000357980 SLC9A2Q9UBY0 812 aa19.02■□□□□ 0.63
TPM1-205ENST00000357980 CPA4Q9UI42 421 aa19.02■□□□□ 0.63
TPM1-205ENST00000357980 IVNS1ABPQ9Y6Y0 642 aa19.02■□□□□ 0.63
TPM1-205ENST00000357980 FRMD3A2A2Y4 597 aa19.01■□□□□ 0.63
TPM1-205ENST00000357980 ZBTB39O15060 712 aa19.01■□□□□ 0.63
TPM1-205ENST00000357980 LYPLA2O95372 231 aa19.01■□□□□ 0.63
TPM1-205ENST00000357980 TGFB3P10600 412 aa19.01■□□□□ 0.63
TPM1-205ENST00000357980 PRCPP42785 496 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms