RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 COASYQ13057 564 aa18.4■□□□□ 0.54
IFT20-202ENST00000357896 NEDD9Q14511 834 aa18.4■□□□□ 0.54
IFT20-202ENST00000357896 ZNF589Q86UQ0 364 aaPredicted RBP18.4■□□□□ 0.54
IFT20-202ENST00000357896 RC3H2Q9HBD1 1191 aaKnown RBP18.4■□□□□ 0.54
IFT20-202ENST00000357896 ALG13Q9NP73 1137 aaKnown RBP18.4■□□□□ 0.54
IFT20-202ENST00000357896 NEDD4P46934 1319 aa18.4■□□□□ 0.54
IFT20-202ENST00000357896 SALL3Q9BXA9 1300 aa18.4■□□□□ 0.54
IFT20-202ENST00000357896 CFAP54Q96N23 3096 aa18.4■□□□□ 0.54
IFT20-202ENST00000357896 ENPP3O14638 875 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 STAM2O75886 525 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 CHRNA1P02708 482 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 ADAM17P78536 824 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 ARHGAP4P98171 946 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 CBX2Q14781 532 aaPredicted RBP18.39■□□□□ 0.53
IFT20-202ENST00000357896 TAF2Q6P1X5 1199 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 METTL7BQ6UX53 244 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 EFHBQ8N7U6 833 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 SMRP1Q8NCR6 262 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 IL31RAQ8NI17 732 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 ZNF689Q96CS4 500 aaPredicted RBP18.39■□□□□ 0.53
IFT20-202ENST00000357896 EHMT1Q9H9B1 1298 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 NRCAMQ92823 1304 aa18.39■□□□□ 0.53
IFT20-202ENST00000357896 GCOM1H8Y6P7 765 aaPredicted RBP18.38■□□□□ 0.53
IFT20-202ENST00000357896 ZBTB5O15062 677 aa18.38■□□□□ 0.53
IFT20-202ENST00000357896 DGKIO75912 1065 aa18.38■□□□□ 0.53
IFT20-202ENST00000357896 POLR2MP0CAP2 368 aa18.38■□□□□ 0.53
IFT20-202ENST00000357896 GHRP10912 638 aa18.38■□□□□ 0.53
IFT20-202ENST00000357896 SIGLEC14Q08ET2 396 aa18.38■□□□□ 0.53
IFT20-202ENST00000357896 NMIQ13287 307 aaPredicted RBP18.38■□□□□ 0.53
IFT20-202ENST00000357896 CAMK1Q14012 370 aa18.38■□□□□ 0.53
IFT20-202ENST00000357896 RSPH3Q86UC2 560 aa18.38■□□□□ 0.53
IFT20-202ENST00000357896 ENAHQ8N8S7 591 aaPredicted RBP18.38■□□□□ 0.53
IFT20-202ENST00000357896 LMBR1Q8WVP7 490 aa18.38■□□□□ 0.53
IFT20-202ENST00000357896 GPKOWQ92917 476 aaPredicted RBP eCLIP18.38■□□□□ 0.53
IFT20-202ENST00000357896 CLEC1BQ9P126 229 aa18.38■□□□□ 0.53
IFT20-202ENST00000357896 CSPG5O95196 566 aa18.37■□□□□ 0.53
IFT20-202ENST00000357896 ICAM3P32942 547 aa18.37■□□□□ 0.53
IFT20-202ENST00000357896 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
IFT20-202ENST00000357896 CYFIP1Q7L576 1253 aa18.37■□□□□ 0.53
IFT20-202ENST00000357896 MTMR8Q96EF0 704 aa18.37■□□□□ 0.53
IFT20-202ENST00000357896 GPR20Q99678 358 aa18.37■□□□□ 0.53
IFT20-202ENST00000357896 SPATA31C2B4DYI2 1134 aa18.36■□□□□ 0.53
IFT20-202ENST00000357896 KLRF2D3W0D1 207 aa18.36■□□□□ 0.53
IFT20-202ENST00000357896 PDE1AP54750 535 aa18.36■□□□□ 0.53
IFT20-202ENST00000357896 LPIN1Q14693 890 aa18.36■□□□□ 0.53
IFT20-202ENST00000357896 FCHSD1Q86WN1 690 aa18.36■□□□□ 0.53
IFT20-202ENST00000357896 CMTR2Q8IYT2 770 aaKnown RBP18.36■□□□□ 0.53
IFT20-202ENST00000357896 SPPL3Q8TCT6 385 aa18.36■□□□□ 0.53
IFT20-202ENST00000357896 ATOH1Q92858 354 aaPredicted RBP18.36■□□□□ 0.53
IFT20-202ENST00000357896 ZFP91Q96JP5 570 aaPredicted RBP18.36■□□□□ 0.53
IFT20-202ENST00000357896 PHF7Q9BWX1 381 aaPredicted RBP18.36■□□□□ 0.53
IFT20-202ENST00000357896 ZFHX2Q9C0A1 2572 aaPredicted RBP18.36■□□□□ 0.53
IFT20-202ENST00000357896 BCAS3Q9H6U6 928 aa18.36■□□□□ 0.53
IFT20-202ENST00000357896 ZSWIM5Q9P217 1185 aa18.36■□□□□ 0.53
IFT20-202ENST00000357896 PCDHB15Q9Y5E8 787 aa18.36■□□□□ 0.53
IFT20-202ENST00000357896 B4E1Z4 1266 aa18.35■□□□□ 0.53
IFT20-202ENST00000357896 FIBPO43427 364 aa18.35■□□□□ 0.53
IFT20-202ENST00000357896 PPP1R11O60927 126 aaPredicted RBP18.35■□□□□ 0.53
IFT20-202ENST00000357896 NUBP1P53384 320 aa18.35■□□□□ 0.53
IFT20-202ENST00000357896 UTP14CQ5TAP6 766 aaKnown RBP18.35■□□□□ 0.53
IFT20-202ENST00000357896 ANKRD45Q5TZF3 282 aa18.35■□□□□ 0.53
IFT20-202ENST00000357896 STAG2Q8N3U4 1231 aa18.35■□□□□ 0.53
IFT20-202ENST00000357896 INPP4AQ96PE3 977 aaPredicted RBP18.35■□□□□ 0.53
IFT20-202ENST00000357896 UBAC1Q9BSL1 405 aa18.35■□□□□ 0.53
IFT20-202ENST00000357896 USP15Q9Y4E8 981 aaPredicted RBP18.35■□□□□ 0.53
IFT20-202ENST00000357896 MRPL42Q9Y6G3 142 aaKnown RBP18.35■□□□□ 0.53
IFT20-202ENST00000357896 MYH6P13533 1939 aa18.35■□□□□ 0.53
IFT20-202ENST00000357896 FSD2A1L4K1 749 aa18.34■□□□□ 0.53
IFT20-202ENST00000357896 RPLP2P05387 115 aaKnown RBP18.34■□□□□ 0.53
IFT20-202ENST00000357896 ITGB1P05556 798 aa18.34■□□□□ 0.53
IFT20-202ENST00000357896 DNAJB1P25685 340 aa18.34■□□□□ 0.53
IFT20-202ENST00000357896 AVPR2P30518 371 aa18.34■□□□□ 0.53
IFT20-202ENST00000357896 NRIP1P48552 1158 aa18.34■□□□□ 0.53
IFT20-202ENST00000357896 IFIT1BQ5T764 474 aaKnown RBP18.34■□□□□ 0.53
IFT20-202ENST00000357896 TSHZ1Q6ZSZ6 1077 aa18.34■□□□□ 0.53
IFT20-202ENST00000357896 TRIM50Q86XT4 487 aa18.34■□□□□ 0.53
IFT20-202ENST00000357896 RPGRIP1Q96KN7 1286 aa18.34■□□□□ 0.53
IFT20-202ENST00000357896 SENP7Q9BQF6 1050 aa18.34■□□□□ 0.53
IFT20-202ENST00000357896 FTHL17Q9BXU8 183 aa18.34■□□□□ 0.53
IFT20-202ENST00000357896 KRT23Q9C075 422 aa18.34■□□□□ 0.53
IFT20-202ENST00000357896 ATG2AQ2TAZ0 1938 aa18.33■□□□□ 0.53
IFT20-202ENST00000357896 ATF7P17544 494 aaPredicted RBP18.33■□□□□ 0.52
IFT20-202ENST00000357896 MRPS9P82933 396 aaKnown RBP18.33■□□□□ 0.52
IFT20-202ENST00000357896 MGAT3Q09327 533 aa18.33■□□□□ 0.52
IFT20-202ENST00000357896 FBXO47Q5MNV8 452 aa18.33■□□□□ 0.52
IFT20-202ENST00000357896 ADGRD2Q7Z7M1 963 aa18.33■□□□□ 0.52
IFT20-202ENST00000357896 RBM23Q86U06 439 aaKnown RBP18.33■□□□□ 0.52
IFT20-202ENST00000357896 KLHL23Q8NBE8 558 aa18.33■□□□□ 0.52
IFT20-202ENST00000357896 GIMAP8Q8ND71 665 aaPredicted RBP18.33■□□□□ 0.52
IFT20-202ENST00000357896 POF1BQ8WVV4 589 aa18.33■□□□□ 0.52
IFT20-202ENST00000357896 TLE6Q9H808 572 aa18.33■□□□□ 0.52
IFT20-202ENST00000357896 CNNM2Q9H8M5 875 aa18.33■□□□□ 0.52
IFT20-202ENST00000357896 FAM86C1Q9NVL1 165 aa18.33■□□□□ 0.52
IFT20-202ENST00000357896 ZDBF2Q9HCK1 2354 aa18.33■□□□□ 0.52
IFT20-202ENST00000357896 STAG3L1P0CL83 205 aa18.32■□□□□ 0.52
IFT20-202ENST00000357896 RUFY4Q6ZNE9 571 aa18.32■□□□□ 0.52
IFT20-202ENST00000357896 HOMER1Q86YM7 354 aa18.32■□□□□ 0.52
IFT20-202ENST00000357896 NPAS4Q8IUM7 802 aa18.32■□□□□ 0.52
IFT20-202ENST00000357896 ASIC4Q96FT7 647 aa18.32■□□□□ 0.52
IFT20-202ENST00000357896 RTEL1Q9NZ71 1219 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms