RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 FAM228AQ86W67 206 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 NELFCDQ8IXH7 590 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 MDM1Q8TC05 714 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 ZNF384Q8TF68 577 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 DDX12PQ92771 950 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 TATDN2Q93075 761 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 DYNLL2Q96FJ2 89 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 RIC8AQ9NPQ8 531 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 ATP8A2Q9NTI2 1148 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 BLOC1S4Q9NUP1 217 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 BIN2Q9UBW5 565 aaPredicted RBP8.41□□□□□ -1.06
CD46-204ENST00000357714 STK17AQ9UEE5 414 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 SWAP70Q9UH65 585 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 MAD2L2Q9UI95 211 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 NFS1Q9Y697 457 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 STRCP1A6NGW2 1772 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 STRCQ7RTU9 1775 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 DUOX1Q9NRD9 1551 aa8.41□□□□□ -1.06
CD46-204ENST00000357714 KLRF2D3W0D1 207 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 MARCH6O60337 910 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 ECHS1P30084 290 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 PDE6BP35913 854 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 GRB10Q13322 594 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 AGBL2Q5U5Z8 902 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 KRT79Q5XKE5 535 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 NAIF1Q69YI7 327 aaPredicted RBP8.4□□□□□ -1.06
CD46-204ENST00000357714 DNAAF5Q86Y56 855 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 ANKS4BQ8N8V4 417 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 CCDC26Q8TAB7 109 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 SNX29Q8TEQ0 813 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 SYN2Q92777 582 aaPredicted RBP8.4□□□□□ -1.06
CD46-204ENST00000357714 NSUN4Q96CB9 384 aaKnown RBP8.4□□□□□ -1.06
CD46-204ENST00000357714 PBKQ96KB5 322 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 SELENOSQ9BQE4 189 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 GOPCQ9HD26 462 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 NIP7Q9Y221 180 aaKnown RBP eCLIP8.4□□□□□ -1.06
CD46-204ENST00000357714 ATP8A1Q9Y2Q0 1164 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 TLDC2A0PJX2 215 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 POTEMA6NI47 508 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 NOL4O94818 638 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 USP11P51784 963 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 CALCRLQ16602 461 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 SLC35G1Q2M3R5 365 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 PEX26Q7Z412 305 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 ZNF444Q8N0Y2 327 aaPredicted RBP8.4□□□□□ -1.06
CD46-204ENST00000357714 CCDC197Q8NCU1 140 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 TCP11Q8WWU5 503 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 CHMP6Q96FZ7 201 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 PSMD1Q99460 953 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 RAB34Q9BZG1 259 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 IL17RBQ9NRM6 502 aa8.4□□□□□ -1.06
CD46-204ENST00000357714 SEC63Q9UGP8 760 aaKnown RBP8.4□□□□□ -1.06
CD46-204ENST00000357714 NOC2LQ9Y3T9 749 aaKnown RBP8.4□□□□□ -1.06
CD46-204ENST00000357714 ZNF804BA4D1E1 1349 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 SMIM23A6NLE4 172 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 TTI1O43156 1089 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 BUB1BO60566 1050 aaPredicted RBP8.4□□□□□ -1.07
CD46-204ENST00000357714 SKAP2O75563 359 aaPredicted RBP8.4□□□□□ -1.07
CD46-204ENST00000357714 TRIM37O94972 964 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 ADAMTS2O95450 1211 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 CLTAP09496 248 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 MYBP10242 640 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 EIF1ADQ8N9N8 165 aaKnown RBP8.4□□□□□ -1.07
CD46-204ENST00000357714 SCFD2Q8WU76 684 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 P3H4Q92791 437 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 RSRC1Q96IZ7 334 aaKnown RBP8.4□□□□□ -1.07
CD46-204ENST00000357714 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.4□□□□□ -1.076e-6■■□□□ 11.7
CD46-204ENST00000357714 ZMYND12Q9H0C1 365 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 ZHX3Q9H4I2 956 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 BMP2KQ9NSY1 1161 aaPredicted RBP8.4□□□□□ -1.07
CD46-204ENST00000357714 TMEM59LQ9UK28 342 aa8.4□□□□□ -1.07
CD46-204ENST00000357714 UTP11Q9Y3A2 253 aaKnown RBP8.4□□□□□ -1.07
CD46-204ENST00000357714 ITGA4P13612 1032 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 PRDX5P30044 214 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 PTK2Q05397 1052 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 XRCC4Q13426 336 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 PRPF4BQ13523 1007 aaKnown RBP8.39□□□□□ -1.07
CD46-204ENST00000357714 UBE4AQ14139 1066 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 NBPF9Q3BBW0 867 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 FAM26FQ5R3K3 315 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 ARHGAP27Q6ZUM4 889 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 TEX11Q8IYF3 940 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 REXO1Q8N1G1 1221 aaKnown RBP8.39□□□□□ -1.07
CD46-204ENST00000357714 PROM2Q8N271 834 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 METTL13Q8N6R0 699 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 CCDC63Q8NA47 563 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 CCT6BQ92526 530 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 FAM84BQ96KN1 310 aaPredicted RBP8.39□□□□□ -1.07
CD46-204ENST00000357714 PNMA5Q96PV4 448 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 CELF4Q9BZC1 486 aaKnown RBP8.39□□□□□ -1.07
CD46-204ENST00000357714 LRRC27Q9C0I9 530 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 CNOT10Q9H9A5 744 aaKnown RBP8.39□□□□□ -1.07
CD46-204ENST00000357714 NOD2Q9HC29 1040 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 PNMA2Q9UL42 364 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 C5orf60A6NFR6 353 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 CCDC188H7C350 402 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 MRPL12P52815 198 aaKnown RBP8.39□□□□□ -1.07
CD46-204ENST00000357714 BYSLQ13895 437 aaKnown RBP8.39□□□□□ -1.07
CD46-204ENST00000357714 CRYMQ14894 314 aa8.39□□□□□ -1.07
CD46-204ENST00000357714 TMC3Q7Z5M5 1100 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms