RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 AKR1B15C9JRZ8 316 aaPredicted RBP16.12■□□□□ 0.17
USP6-202ENST00000357482 PRC1O43663 620 aa16.12■□□□□ 0.17
USP6-202ENST00000357482 KIF4AO95239 1232 aa16.12■□□□□ 0.17
USP6-202ENST00000357482 IFI16Q16666 785 aaKnown RBP16.12■□□□□ 0.17
USP6-202ENST00000357482 LMNTD2Q8IXW0 634 aa16.12■□□□□ 0.17
USP6-202ENST00000357482 PDILTQ8N807 584 aa16.12■□□□□ 0.17
USP6-202ENST00000357482 CYFIP2Q96F07 1278 aa16.12■□□□□ 0.17
USP6-202ENST00000357482 FSD1Q9BTV5 496 aa16.12■□□□□ 0.17
USP6-202ENST00000357482 CFHR5Q9BXR6 569 aa16.12■□□□□ 0.17
USP6-202ENST00000357482 OSBPL1AQ9BXW6 950 aa16.12■□□□□ 0.17
USP6-202ENST00000357482 HSD3B7Q9H2F3 369 aa16.12■□□□□ 0.17
USP6-202ENST00000357482 RABEP2Q9H5N1 569 aa16.12■□□□□ 0.17
USP6-202ENST00000357482 NDUFB9Q9Y6M9 179 aa16.12■□□□□ 0.17
USP6-202ENST00000357482 ATP6V1G1O75348 118 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 ENTPD3O75355 529 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 PAX3P23760 479 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 RPL13P26373 211 aaKnown RBP16.11■□□□□ 0.17
USP6-202ENST00000357482 NLRP5P59047 1200 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 ZNF268Q14587 947 aaPredicted RBP16.11■□□□□ 0.17
USP6-202ENST00000357482 SYNE3Q6ZMZ3 975 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 MAATS1Q7Z4T9 603 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 NSUN4Q96CB9 384 aaKnown RBP16.11■□□□□ 0.17
USP6-202ENST00000357482 IDI2Q9BXS1 227 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 LZTFL1Q9NQ48 299 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 TRPV5Q9NQA5 729 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 FANCLQ9NW38 375 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 HIP1O00291 1037 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 CEP104O60308 925 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 GNAQP50148 359 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 CRHR2Q13324 411 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 PPP1R15BQ5SWA1 713 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 SFMBT2Q5VUG0 894 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 TRAPPC11Q7Z392 1133 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 MAIP1Q8WWC4 291 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 ATRIPQ8WXE1 791 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 CAVIN3Q969G5 261 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 MS4A4AQ96JQ5 239 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 PTPN18Q99952 460 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 LLPHQ9BRT6 129 aaKnown RBP16.11■□□□□ 0.17
USP6-202ENST00000357482 CIDEBQ9UHD4 219 aa16.11■□□□□ 0.17
USP6-202ENST00000357482 RFX7Q2KHR2 1363 aa16.1■□□□□ 0.17
USP6-202ENST00000357482 A0A1B0GVL5 298 aa16.1■□□□□ 0.17
USP6-202ENST00000357482 GMNCA6NCL1 334 aa16.1■□□□□ 0.17
USP6-202ENST00000357482 HMGB1P1B2RPK0 211 aaPredicted RBP16.1■□□□□ 0.17
USP6-202ENST00000357482 EPHB4P54760 987 aa16.1■□□□□ 0.17
USP6-202ENST00000357482 NMIQ13287 307 aaPredicted RBP16.1■□□□□ 0.17
USP6-202ENST00000357482 SNAPC2Q13487 334 aa16.1■□□□□ 0.17
USP6-202ENST00000357482 Q6ZUG5 572 aa16.1■□□□□ 0.17
USP6-202ENST00000357482 CACNA2D3Q8IZS8 1091 aa16.1■□□□□ 0.17
USP6-202ENST00000357482 SMYD1Q8NB12 490 aa16.1■□□□□ 0.17
USP6-202ENST00000357482 BRI3BPQ8WY22 251 aa16.1■□□□□ 0.17
USP6-202ENST00000357482 SPATA7Q9P0W8 599 aa16.1■□□□□ 0.17
USP6-202ENST00000357482 CTNNAL1Q9UBT7 734 aa16.1■□□□□ 0.17
USP6-202ENST00000357482 TESPA1A2RU30 521 aaPredicted RBP16.09■□□□□ 0.17
USP6-202ENST00000357482 M0R2C6 588 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 CETPP11597 493 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 ATP1A3P13637 1013 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 TNFRSF8P28908 595 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 ITIH3Q06033 890 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 TAF1CQ15572 869 aaPredicted RBP16.09■□□□□ 0.17
USP6-202ENST00000357482 KBTBD12Q3ZCT8 623 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 PABPC1LQ4VXU2 614 aaKnown RBP16.09■□□□□ 0.17
USP6-202ENST00000357482 TTMPQ5BVD1 217 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 SH2D4BQ5SQS7 431 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 CCDC155Q8N6L0 562 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 CCDC63Q8NA47 563 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 ZNF384Q8TF68 577 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 HVCN1Q96D96 273 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 FAM227BQ96M60 508 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 IWS1Q96ST2 819 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 DMAP1Q9NPF5 467 aaPredicted RBP16.09■□□□□ 0.17
USP6-202ENST00000357482 DDX4Q9NQI0 724 aaKnown RBP16.09■□□□□ 0.17
USP6-202ENST00000357482 LAMB1P07942 1786 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 VCAM1P19320 739 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 FECHP22830 423 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 ZAP70P43403 619 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 ME1P48163 572 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 PSMD7P51665 324 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 PPIL2Q13356 520 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 MPP3Q13368 585 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 PKN2Q16513 984 aaKnown RBP16.09■□□□□ 0.17
USP6-202ENST00000357482 CCDC92Q53HC0 331 aaPredicted RBP16.09■□□□□ 0.17
USP6-202ENST00000357482 ZMYM1Q5SVZ6 1142 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 HIBCHQ6NVY1 386 aaPredicted RBP16.09■□□□□ 0.17
USP6-202ENST00000357482 CACNA2D4Q7Z3S7 1137 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.09■□□□□ 0.17
USP6-202ENST00000357482 SNRNP27Q8WVK2 155 aaKnown RBP16.09■□□□□ 0.17
USP6-202ENST00000357482 RNPC3Q96LT9 517 aaKnown RBP16.09■□□□□ 0.17
USP6-202ENST00000357482 TUBE1Q9UJT0 475 aa16.09■□□□□ 0.17
USP6-202ENST00000357482 DOCK2Q92608 1830 aa16.08■□□□□ 0.17
USP6-202ENST00000357482 CCDC166P0CW27 439 aa16.08■□□□□ 0.16
USP6-202ENST00000357482 NR1D1P20393 614 aa16.08■□□□□ 0.16
USP6-202ENST00000357482 PPATQ06203 517 aa16.08■□□□□ 0.16
USP6-202ENST00000357482 MPHOSPH6Q99547 160 aaKnown RBP16.08■□□□□ 0.16
USP6-202ENST00000357482 DESI2Q9BSY9 194 aa16.08■□□□□ 0.16
USP6-202ENST00000357482 VCXQ9H320 206 aa16.08■□□□□ 0.16
USP6-202ENST00000357482 VCX3BQ9H321 246 aa16.08■□□□□ 0.16
USP6-202ENST00000357482 NDST4Q9H3R1 872 aa16.08■□□□□ 0.16
USP6-202ENST00000357482 ZFYVE28Q9HCC9 887 aa16.08■□□□□ 0.16
USP6-202ENST00000357482 VCX3AQ9NNX9 186 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms