RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 MXI1P50539 228 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 SEMA3FQ13275 785 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 ENGASEQ8NFI3 743 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 L2HGDHQ9H9P8 463 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 ADD3Q9UEY8 706 aaKnown RBP16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 LIMA1Q9UHB6 759 aaKnown RBP16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 XDHP47989 1333 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 TRIM66O15016 1216 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 P4HA1P13674 534 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 TMOD1P28289 359 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 FXR1P51114 621 aaKnown RBP eCLIP16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 SLC12A2P55011 1212 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 UBE2SQ16763 222 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 FAM98CQ17RN3 349 aaKnown RBP16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 SH2D4BQ5SQS7 431 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 MMS19Q96T76 1030 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 MAD1L1Q9Y6D9 718 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 PPP2R2AP63151 447 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 ATP2C1P98194 919 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 NLRP14Q86W24 1093 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 ATP6V1G3Q96LB4 118 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 ACCSQ96QU6 501 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 DDX47Q9H0S4 455 aaKnown RBP16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 PCIF1Q9H4Z3 704 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 TAF1DQ9H5J8 278 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 TMOD4Q9NZQ9 345 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 TAF6LQ9Y6J9 622 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 UNC13BO14795 1591 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 SKIP12755 728 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 RCN2Q14257 317 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 NR1I3Q14994 352 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 DIXDC1Q155Q3 683 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 TTBK2Q6IQ55 1244 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 RAD9BQ6WBX8 426 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 USH1CQ9Y6N9 552 aa16.88■□□□□ 0.29
TRAPPC11-202ENST00000357207 GSG1L2A8MUP6 293 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 MIF4GDA9UHW6 222 aaKnown RBP16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 SCARF1Q14162 830 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 GNPTABQ3T906 1256 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 RABL6Q3YEC7 729 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 MXD3Q9BW11 206 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 BHMT2Q9H2M3 363 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 GLI2P10070 1586 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 CRB1P82279 1406 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 H7C0C1 242 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 ZBTB22O15209 634 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 ATP5OP48047 213 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 TXNRD1Q16881 649 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 GUF1Q8N442 669 aaKnown RBP16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 TMEM206Q9H813 350 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 SNX12Q9UMY4 172 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 DIS3Q9Y2L1 958 aaKnown RBP16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 ZNF609O15014 1411 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 ADGRL3Q9HAR2 1447 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 SERPINB6P35237 376 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 RWDD2BP57060 319 aa16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 TRIP13Q15645 432 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC11-202ENST00000357207 ALDH1B1P30837 517 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 MSH2P43246 934 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 MRPS9P82933 396 aaKnown RBP16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 KCNH2Q12809 1159 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 PPP2R5AQ15172 486 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 TRIM42Q8IWZ5 723 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 FBXO41Q8TF61 875 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 ZNF577Q9BSK1 485 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 LRRC1Q9BTT6 524 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 KANSL2Q9H9L4 492 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 MRPL47Q9HD33 250 aaKnown RBP16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 PPP1R9AQ9ULJ8 1098 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 POTEMA6NI47 508 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 CHGBP05060 677 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 GUCY1A2P33402 732 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 GSDMBQ8TAX9 411 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 GLG1Q92896 1179 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 PITPNM3Q9BZ71 974 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 EDEM3Q9BZQ6 932 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 DNAJC17Q9NVM6 304 aaKnown RBP16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 PCDHB4Q9Y5E5 795 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 PP2D1A8MPX8 630 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 RFC1P35251 1148 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 HLFQ16534 295 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 ZNF449Q6P9G9 518 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 TUBB6Q9BUF5 446 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 SCOCQ9UIL1 159 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 GRID2IPA4D2P6 1211 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 MAPK13O15264 365 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 PPP1R37O75864 691 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 ACTN3Q08043 901 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 ERFEQ4G0M1 354 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 ARHGEF16Q5VV41 709 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 SUSD4Q5VX71 490 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 CCDC125Q86Z20 511 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 LARGE2Q8N3Y3 721 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 HVCN1Q96D96 273 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 MIS12Q9H081 205 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 PSD3Q9NYI0 1048 aa16.86■□□□□ 0.29
TRAPPC11-202ENST00000357207 LRRIQ4A6NIV6 560 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 UBAP1LF5GYI3 381 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms