RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 ESYT2A0FGR8 921 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 CLIC2O15247 247 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 USO1O60763 962 aaKnown RBP16.8■□□□□ 0.28
PTBP1-203ENST00000356948 MYBP10242 640 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 SIAH1Q8IUQ4 282 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 BANK1Q8NDB2 785 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 CUL5Q93034 780 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 NFU1Q9UMS0 254 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 ZBTB5O15062 677 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 ADAM9Q13443 819 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 CATSPER3Q86XQ3 398 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 RBM17Q96I25 401 aaKnown RBP16.8■□□□□ 0.28
PTBP1-203ENST00000356948 GBP3Q9H0R5 595 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 RGL1Q9NZL6 768 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 HYOU1Q9Y4L1 999 aa16.8■□□□□ 0.28
PTBP1-203ENST00000356948 FAM86B1E9PN63 330 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 FAM86B2P0C5J1 330 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 FKBP3Q00688 224 aaKnown RBP16.79■□□□□ 0.28
PTBP1-203ENST00000356948 ASPRV1Q53RT3 343 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 MUM1L1Q5H9M0 696 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 CCDC181Q5TID7 509 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 AFAP1L1Q8TED9 768 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 FAM163AQ96GL9 167 aaPredicted RBP16.79■□□□□ 0.28
PTBP1-203ENST00000356948 KCTD10Q9H3F6 313 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 CKAP4Q07065 602 aaKnown RBP16.79■□□□□ 0.28
PTBP1-203ENST00000356948 PDIA5Q14554 519 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 SEPT2Q15019 361 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 EHBP1Q8NDI1 1231 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 EMILIN3Q9NT22 766 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 PSD3Q9NYI0 1048 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 ANO9A1A5B4 782 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 GOLGA6BA6NDN3 693 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 KRT18P05783 430 aaKnown RBP16.79■□□□□ 0.28
PTBP1-203ENST00000356948 CDK17Q00537 523 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 ZNF662Q6ZS27 426 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 SH3BP5LQ7L8J4 393 aa16.79■□□□□ 0.28
PTBP1-203ENST00000356948 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.79■□□□□ 0.28
PTBP1-203ENST00000356948 MEIS2O14770 477 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 IVLP07476 585 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 LRRC63Q05C16 580 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 KIAA0753Q2KHM9 967 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 KLHL7Q8IXQ5 586 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 PIGOQ8TEQ8 1089 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■■■□ 23.3
PTBP1-203ENST00000356948 ATP1A2P50993 1020 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 RBM5P52756 815 aaKnown RBP eCLIP16.78■□□□□ 0.281e-6■■□□□ 11.4
PTBP1-203ENST00000356948 PTK2Q05397 1052 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 KCNH2Q12809 1159 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 TTMPQ5BVD1 217 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 DCAF17Q5H9S7 520 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-203ENST00000356948 SFMBT2Q5VUG0 894 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 DDX42Q86XP3 938 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■□□□□ 10.6
PTBP1-203ENST00000356948 KRT12Q99456 494 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 POLRMTO00411 1230 aaKnown RBP16.78■□□□□ 0.28
PTBP1-203ENST00000356948 PPEF1O14829 653 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-203ENST00000356948 LCA5LO95447 670 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 PLCG2P16885 1265 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 SETQ01105 290 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-203ENST00000356948 GUCY2DQ02846 1103 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 PPP4R3AQ6IN85 833 aa16.78■□□□□ 0.28
PTBP1-203ENST00000356948 C15orf52Q6ZUT6 534 aaKnown RBP16.78■□□□□ 0.28
PTBP1-203ENST00000356948 TRMT1LQ7Z2T5 733 aaKnown RBP16.78■□□□□ 0.28
PTBP1-203ENST00000356948 CCDC84Q86UT8 332 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-203ENST00000356948 RBM46Q8TBY0 533 aaKnown RBP16.78■□□□□ 0.28
PTBP1-203ENST00000356948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.78■□□□□ 0.285e-7■■■■■ 80.5
PTBP1-203ENST00000356948 ATF5Q9Y2D1 282 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-203ENST00000356948 NR2F2P24468 414 aa16.77■□□□□ 0.28
PTBP1-203ENST00000356948 RRP1BQ14684 758 aaKnown RBP16.77■□□□□ 0.28
PTBP1-203ENST00000356948 CDC37Q16543 378 aaPredicted RBP16.77■□□□□ 0.28
PTBP1-203ENST00000356948 MSL1Q68DK7 614 aa16.77■□□□□ 0.28
PTBP1-203ENST00000356948 SFR1Q86XK3 245 aa16.77■□□□□ 0.28
PTBP1-203ENST00000356948 EPB41L5Q9HCM4 733 aa16.77■□□□□ 0.28
PTBP1-203ENST00000356948 SCAF8Q9UPN6 1271 aaKnown RBP16.77■□□□□ 0.28
PTBP1-203ENST00000356948 TARSL2A2RTX5 802 aaKnown RBP16.77■□□□□ 0.28
PTBP1-203ENST00000356948 LRRN2O75325 713 aa16.77■□□□□ 0.28
PTBP1-203ENST00000356948 ZNF571Q7Z3V5 609 aaPredicted RBP16.77■□□□□ 0.28
PTBP1-203ENST00000356948 TRIM59Q8IWR1 403 aa16.77■□□□□ 0.28
PTBP1-203ENST00000356948 CERKQ8TCT0 537 aa16.77■□□□□ 0.28
PTBP1-203ENST00000356948 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
PTBP1-203ENST00000356948 ANO3Q9BYT9 981 aa16.77■□□□□ 0.28
PTBP1-203ENST00000356948 TSG101Q99816 390 aa16.77■□□□□ 0.27
PTBP1-203ENST00000356948 AP1M1Q9BXS5 423 aa16.77■□□□□ 0.27
PTBP1-203ENST00000356948 ZC3H12CQ9C0D7 883 aaKnown RBP16.77■□□□□ 0.27
PTBP1-203ENST00000356948 FAM184BQ9ULE4 1060 aa16.77■□□□□ 0.27
PTBP1-203ENST00000356948 EML1O00423 815 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 CHMP2AO43633 222 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 TRIM37O94972 964 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 SPATA31C1P0DKV0 1188 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 SLC12A3P55017 1021 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 SLC20A2Q08357 652 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 IKQ13123 557 aaPredicted RBP16.76■□□□□ 0.27
PTBP1-203ENST00000356948 COG2Q14746 738 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 COBLL1Q53SF7 1204 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 TCERG1LQ5VWI1 586 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 MMGT1Q8N4V1 131 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 MED4Q9NPJ6 270 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 AKAP3O75969 853 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 ZC2HC1CQ53FD0 456 aaPredicted RBP16.76■□□□□ 0.27
PTBP1-203ENST00000356948 RUSC1Q9BVN2 902 aa16.76■□□□□ 0.27
PTBP1-203ENST00000356948 RAB34Q9BZG1 259 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms