RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 BRMS1Q9HCU9 246 aa23.16■■□□□ 1.3
CHRD-203ENST00000356534 TBC1D22BQ9NU19 505 aa23.16■■□□□ 1.3
CHRD-203ENST00000356534 ERAP1Q9NZ08 941 aa23.16■■□□□ 1.3
CHRD-203ENST00000356534 IGLV3-22A0A075B6J6 115 aa23.15■■□□□ 1.3
CHRD-203ENST00000356534 FAM86B1E9PN63 330 aa23.15■■□□□ 1.3
CHRD-203ENST00000356534 LARGE1O95461 756 aa23.15■■□□□ 1.3
CHRD-203ENST00000356534 FAM86B2P0C5J1 330 aa23.15■■□□□ 1.3
CHRD-203ENST00000356534 ARP10275 920 aa23.15■■□□□ 1.3
CHRD-203ENST00000356534 CCL23P55773 120 aa23.15■■□□□ 1.3
CHRD-203ENST00000356534 C9orf50Q5SZB4 431 aa23.15■■□□□ 1.3
CHRD-203ENST00000356534 PHF20Q9BVI0 1012 aa23.15■■□□□ 1.3
CHRD-203ENST00000356534 WNT8AQ9H1J5 351 aa23.15■■□□□ 1.3
CHRD-203ENST00000356534 SH2B1Q9NRF2 756 aaPredicted RBP23.15■■□□□ 1.3
CHRD-203ENST00000356534 UMODL1Q5DID0 1318 aa23.14■■□□□ 1.3
CHRD-203ENST00000356534 IPO5O00410 1097 aaKnown RBP23.14■■□□□ 1.29
CHRD-203ENST00000356534 CTDNEP1O95476 244 aa23.14■■□□□ 1.29
CHRD-203ENST00000356534 SMIM10L2AP0DMW4 78 aa23.14■■□□□ 1.29
CHRD-203ENST00000356534 SMIM10L2BP0DMW5 78 aa23.14■■□□□ 1.29
CHRD-203ENST00000356534 NONOQ15233 471 aaKnown RBP eCLIP23.14■■□□□ 1.29
CHRD-203ENST00000356534 NECAB1Q8N987 351 aa23.14■■□□□ 1.29
CHRD-203ENST00000356534 NSUN7Q8NE18 718 aaKnown RBP23.14■■□□□ 1.29
CHRD-203ENST00000356534 PPP1R13LQ8WUF5 828 aa23.14■■□□□ 1.29
CHRD-203ENST00000356534 GLG1Q92896 1179 aa23.14■■□□□ 1.29
CHRD-203ENST00000356534 AIFM3Q96NN9 605 aa23.14■■□□□ 1.29
CHRD-203ENST00000356534 ZNF577Q9BSK1 485 aa23.14■■□□□ 1.29
CHRD-203ENST00000356534 EVPLQ92817 2033 aa23.13■■□□□ 1.29
CHRD-203ENST00000356534 CCDC194A0A1B0GVG4 234 aa23.13■■□□□ 1.29
CHRD-203ENST00000356534 GSTTP1A0A1W2PQM5 241 aa23.13■■□□□ 1.29
CHRD-203ENST00000356534 ST18O60284 1047 aa23.13■■□□□ 1.29
CHRD-203ENST00000356534 LGR5O75473 907 aa23.13■■□□□ 1.29
CHRD-203ENST00000356534 HOXC8P31273 242 aa23.13■■□□□ 1.29
CHRD-203ENST00000356534 PRR16Q569H4 304 aa23.13■■□□□ 1.29
CHRD-203ENST00000356534 MOXD1Q6UVY6 613 aa23.13■■□□□ 1.29
CHRD-203ENST00000356534 TRIM50Q86XT4 487 aa23.13■■□□□ 1.29
CHRD-203ENST00000356534 TBCKQ8TEA7 893 aa23.13■■□□□ 1.29
CHRD-203ENST00000356534 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.13■■□□□ 1.292e-7■□□□□ 9.8
CHRD-203ENST00000356534 NRCAMQ92823 1304 aa23.12■■□□□ 1.29
CHRD-203ENST00000356534 M0R2N6 131 aa23.12■■□□□ 1.29
CHRD-203ENST00000356534 SLC26A2P50443 739 aa23.12■■□□□ 1.29
CHRD-203ENST00000356534 EPHB4P54760 987 aa23.12■■□□□ 1.29
CHRD-203ENST00000356534 ACTR2P61160 394 aa23.12■■□□□ 1.29
CHRD-203ENST00000356534 KRT76Q01546 638 aa23.12■■□□□ 1.29
CHRD-203ENST00000356534 ITGB3BPQ13352 177 aaPredicted RBP23.12■■□□□ 1.29
CHRD-203ENST00000356534 TRIM29Q14134 588 aa23.12■■□□□ 1.29
CHRD-203ENST00000356534 TMEM240Q5SV17 173 aa23.12■■□□□ 1.29
CHRD-203ENST00000356534 ATP6V0A1Q93050 837 aa23.12■■□□□ 1.29
CHRD-203ENST00000356534 KIF2CQ99661 725 aa23.12■■□□□ 1.29
CHRD-203ENST00000356534 NAP1L4Q99733 375 aaKnown RBP23.12■■□□□ 1.29
CHRD-203ENST00000356534 LLPHQ9BRT6 129 aaKnown RBP23.12■■□□□ 1.29
CHRD-203ENST00000356534 LOXHD1Q8IVV2 1947 aa23.12■■□□□ 1.29
CHRD-203ENST00000356534 LAMA3Q16787 3333 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 MICAL3Q7RTP6 2002 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 ADAMTS3O15072 1205 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 CAND2O75155 1236 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 FGBP02675 491 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 ACTN1P12814 892 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 SELPP16109 830 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 NPY5RQ15761 445 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 FAM160B1Q5W0V3 765 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 ZNF746Q6NUN9 644 aaPredicted RBP23.11■■□□□ 1.29
CHRD-203ENST00000356534 SERINC5Q86VE9 423 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 SMAP1Q8IYB5 467 aaPredicted RBP23.11■■□□□ 1.29
CHRD-203ENST00000356534 SCLYQ96I15 445 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 CTAGE1Q96RT6 745 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 RNPEPQ9H4A4 650 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 KCNJ14Q9UNX9 436 aa23.11■■□□□ 1.29
CHRD-203ENST00000356534 SOX1O00570 391 aaPredicted RBP23.1■■□□□ 1.29
CHRD-203ENST00000356534 ATG7O95352 703 aa23.1■■□□□ 1.29
CHRD-203ENST00000356534 RPLP2P05387 115 aaKnown RBP23.1■■□□□ 1.29
CHRD-203ENST00000356534 IQCF3P0C7M6 154 aa23.1■■□□□ 1.29
CHRD-203ENST00000356534 HMGN5P82970 282 aaKnown RBP23.1■■□□□ 1.29
CHRD-203ENST00000356534 SMAD3P84022 425 aaKnown RBP23.1■■□□□ 1.29
CHRD-203ENST00000356534 ZNF365Q70YC5 407 aa23.1■■□□□ 1.29
CHRD-203ENST00000356534 LRRC8DQ7L1W4 858 aa23.1■■□□□ 1.29
CHRD-203ENST00000356534 PLPPR4Q7Z2D5 763 aa23.1■■□□□ 1.29
CHRD-203ENST00000356534 HERVK_113Q902F9 699 aa23.1■■□□□ 1.29
CHRD-203ENST00000356534 MYO9BQ13459 2157 aa23.09■■□□□ 1.29
CHRD-203ENST00000356534 ACRP10323 421 aa23.09■■□□□ 1.29
CHRD-203ENST00000356534 GCFC2P16383 781 aaKnown RBP23.09■■□□□ 1.29
CHRD-203ENST00000356534 KRT2P35908 639 aa23.09■■□□□ 1.29
CHRD-203ENST00000356534 PPFIA1Q13136 1202 aa23.09■■□□□ 1.29
CHRD-203ENST00000356534 Q4G0T1 1027 aa23.09■■□□□ 1.29
CHRD-203ENST00000356534 MIS18BP1Q6P0N0 1132 aa23.09■■□□□ 1.29
CHRD-203ENST00000356534 DHX38Q92620 1227 aaKnown RBP23.09■■□□□ 1.29
CHRD-203ENST00000356534 LRCH3Q96II8 777 aa23.09■■□□□ 1.29
CHRD-203ENST00000356534 SIP14410 1827 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 CYP3A7-CYP3A51PA0A087WV96 503 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 RRN3P2A6NIE6 340 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 DDX39AO00148 427 aaKnown RBP23.08■■□□□ 1.29
CHRD-203ENST00000356534 CKBP12277 381 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 FDPSP14324 419 aaKnown RBP23.08■■□□□ 1.29
CHRD-203ENST00000356534 CYP3A7P24462 503 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 STAT5BP51692 787 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 NEK8Q86SG6 692 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 CCDC83Q8IWF9 413 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 LMBR1Q8WVP7 490 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 LENG9Q96B70 501 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 RIT2Q99578 217 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 TELO2Q9Y4R8 837 aa23.08■■□□□ 1.29
CHRD-203ENST00000356534 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms